Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g00765 ATGGGTTGCAGAAACAGGGACTCCTTCCCAGATAATCATTCTTCACCTTCTTGTGATTCGCTCGGCGAGGCCCTGCTTTTGACCACCGTATGCATCGTAGGTCTCCCAGTGGATGTTCATGTCAAGGATGGCTCTGTGTATTCTGGAATCTTCCACACTACTTCTGCTCATGCCGATTATGGTATTGTTTTAAAGAAAGCAAGGATGACCAAGATGGGAAAAGGCATCAGCAATGTTGGAAATGAGGGCCTTGTGGATACATTGGTGATTTTATCCAGTGATCTTGTGCAAGTTGTTGCTAAGGAAGTAATGCTTTCGGCAGATGGTGTTGGTGAAAACATAACTGTTGATAATGAAGAAGAAGTTGCCGATAATGTATCTTCTGAGAGCCTAACGCGTGAGGCAGAGAATCATACAAAGCCCTTAATGGATGCAAATCAAGTTAATCAATCAAGACAAGTCGGAGATGAAAGGTCAAACTTAGATGGGAAAGCCGATGACCACATGCAGAAGTCTGAGGTTTTTAATGAAAAAAATGAGGAAAGGATTCAAAGTCCCAATTCAAGGCATGAAAGCCAACAGGTAGCTGTTAAGCATGGAGGCACAGATAGAACATCAAATCCTTCTAATGGTGGATTATTCTGCAGCAGTGCTCCTGCATCTGTTAAAGCCAATGATTGGTTTGGTGAAAGGTCTGTTTCACCAGAGTCTATCTCTACAAATTCAACCCAAGGTGCGGATCTCATCAAAGAGTCACATCCAGCAAGGCCCATTGAAATATCTGTTCCAAGGAGTACAGGTTCTACCATAAATGCTAAGGAGTTTAAGCTCAATCCAGCCGCCAAAACCTTCTCTCCATCTTTTGTGAATCCTATATCATCAGCTTCTGTGGCAAATTTGTTATACGTACAAAATAGCTCTCCTGTGGTACCTGTTGGTAGTATTCAACCAGAAGCTGGATTCAACACTTTTGCTTCTCGGCCTTCGGTGCCTGTAAAGGTTGCACAATATAGTAATTTGCCAGTGGGAAATGGTGGAAGTGGCTCTCAGTTTTCACAACCTATTATTGGACATGTGCCGCATAGAAATCAACCACTCCGGTATCCTACACATTACACTCCTGTTTTGTCTGAACCTGCTTATATGCAACCAAGCTCTCCTGCTGTAATGATTGGACGTTCACCCCAGTTAGTATATGTTCAGCCACTTTCCCACGATTTAATTCATGGAACACCGACCGTTGCACCAGTCTCAGCTCGCCCTCTGTTGAATCATCATGTACCATTTCCAAAGCAGCAAGGAGGGACAATTGGTCCAGCAATGCCAGTTTGTGTGCCCCCTCCTGTCCTAACCAGTGGACATCAGCCCTTTGCATTTCAAAGCCACATCCCACTTCTGCAATCTGGCTTTCCTGTCACACGACCTATTTCAGTCCCAGGACCAAATGGTTTCTATGGTACTAAATTTTAG 1470 0.4401 MGCRNRDSFPDNHSSPSCDSLGEALLLTTVCIVGLPVDVHVKDGSVYSGIFHTTSAHADYGIVLKKARMTKMGKGISNVGNEGLVDTLVILSSDLVQVVAKEVMLSADGVGENITVDNEEEVADNVSSESLTREAENHTKPLMDANQVNQSRQVGDERSNLDGKADDHMQKSEVFNEKNEERIQSPNSRHESQQVAVKHGGTDRTSNPSNGGLFCSSAPASVKANDWFGERSVSPESISTNSTQGADLIKESHPARPIEISVPRSTGSTINAKEFKLNPAAKTFSPSFVNPISSASVANLLYVQNSSPVVPVGSIQPEAGFNTFASRPSVPVKVAQYSNLPVGNGGSGSQFSQPIIGHVPHRNQPLRYPTHYTPVLSEPAYMQPSSPAVMIGRSPQLVYVQPLSHDLIHGTPTVAPVSARPLLNHHVPFPKQQGGTIGPAMPVCVPPPVLTSGHQPFAFQSHIPLLQSGFPVTRPISVPGPNGFYGTKF 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g00765 489 MobiDBLite consensus disorder prediction 142 156 - -
Viun6g00765 489 MobiDBLite consensus disorder prediction 157 187 - -
Viun6g00765 489 MobiDBLite consensus disorder prediction 120 214 - -
Viun6g00765 489 Pfam Ataxin 2 SM domain 24 101 IPR025852 -
Viun6g00765 489 PANTHER ATAXIN 2-RELATED 135 439 IPR045117 GO:0003723
Viun6g00765 489 MobiDBLite consensus disorder prediction 188 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g00765 Viun-Chr6 17332222 17339380 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g00765 - - var:108318922 882.863
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun6g00765 6 17332222 17339380 Viun6g00765 6 17332222 17339380 ECH