Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g00751 ATGAGAAGAAGACCAGGAATTGGAGGGTTGCAGACGCATGCTGCTGCAAGGGACCAATTCCGTTTGTTGGGTGAAAATGTCGCGAAGATCCGAACGGATTTGATGAAAGAGCAGCTTGCCACCTTTCGCTCTCAGCTCGAAGATTTCGCTCGCAAACACAAGAATGACATACGCAAGAACCCTGCATTCAGATCACAGTTTCATGAGATGTGTGCTAAAGTTGGAGTGGATCCCTTGGCCTCAAACAAGGGTTTCTGGGCAGAGCTGTTAGGAATTGGTGACTTCTATTATGAACTGGGAGTTCAAATAGTGGATATTTGCTTGGCTACTAGAGTGCATAATGGAGGATTGATCAACCTGCAGGAACTCTGCCATCTCCTTCGCCAGAGACGAAAAAGTGATCGAGGAGTTGTTTCAGAGGATGATTGCCTGCGAGCTATTAGTAAGCTGAAGGTGTTGGGTAGTGGGTTTGAAGTAATTACTGTTGGAAAGAAAAAACTTGTTCGTTCAGTTCCAACTGAGTTGAACAAAGACCACAACGAAATTCTAGAACTTGCCCAGGCTCAAGGATTTGTGACAGTCGATGAAGTAGAGAGACGATTATCTTGGAGTTCTGGCCGAGCCATTGATGCCCTCGATACATTACTTGATGAAGGACTTGCTATGATTGATGATGGCCATAGAGATGGTAGACGGAGGTACTGGTTTCCTTGTGTGTCTCCTATCTCATCTTCAACAGCAGTTGATTCCTAA 753 0.4529 MRRRPGIGGLQTHAAARDQFRLLGENVAKIRTDLMKEQLATFRSQLEDFARKHKNDIRKNPAFRSQFHEMCAKVGVDPLASNKGFWAELLGIGDFYYELGVQIVDICLATRVHNGGLINLQELCHLLRQRRKSDRGVVSEDDCLRAISKLKVLGSGFEVITVGKKKLVRSVPTELNKDHNEILELAQAQGFVTVDEVERRLSWSSGRAIDALDTLLDEGLAMIDDGHRDGRRRYWFPCVSPISSSTAVDS 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g00751 250 Gene3D - 24 85 - -
Viun6g00751 250 PIRSF ESCRT2_Vps22 1 246 IPR016689 GO:0000814|GO:0071985
Viun6g00751 250 SUPERFAMILY "Winged helix" DNA-binding domain 24 174 IPR036390 -
Viun6g00751 250 PANTHER EAP30 SUBUNIT OF ELL COMPLEX 1 241 IPR016689 GO:0000814|GO:0071985
Viun6g00751 250 FunFam Vacuolar-sorting protein SNF8 91 171 - -
Viun6g00751 250 SUPERFAMILY "Winged helix" DNA-binding domain 175 238 IPR036390 -
Viun6g00751 250 Gene3D - 172 250 IPR036388 -
Viun6g00751 250 Pfam EAP30/Vps36 family 6 225 IPR040608 -
Viun6g00751 250 FunFam Vacuolar protein sorting-associated protein 172 250 - -
Viun6g00751 250 Gene3D - 91 171 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g00751 Viun-Chr6 17208142 17212243 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g00751 K12188 - gmx:100796153 480.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun6g00751 6 17208142 17212243 Viun6g00751 6 17208142 17212243 ECH