Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g00740 ATGAGTACACTTGAATCACCGCCAAGATTAGTTTCTCAGGAATCAGCACCAACCTTGGTTTCTCAAGAATCATCAACGATAATTGAAGGAACAGAAGAAGTTAGAAGCGGGGATGAGATATCACTGTTCCGAGGGTGCGTACTGGAAGGAAGATGGGAGTTCGTTATTCCTGCGTACAGAAACGAGAGTGAGTTTCACAAAATCAGAATCAACGAAAGCAGAGGCACTGCACTGCATGTGGCAGTGAATGATGGGAAAGTGGAGCTTGTTAACATTCTTGTTGGATCAATCTTGAGCCACGAAGGGAGGGAAGTGGTGAGGAGTAACAGTGCACTGAGATCAACCGATGAGAGAGGGGACACTCCTTTGCACCTTGCAGCCTCAAGAGGGTTCATTTCCATGATTAAGTGCATCATTGGGGAAAATGGTGAAAGGAAGGATCTGATTAGGGTTAGGAACAACAGGGGTGAAACACCTCTTTTCAGGGCTGTGCTCACATCCCAAACAAAGGCCTTTGTTTACCTTTACAATGTTTCCAAAGGATTAGAAGTTCCTCTTAAGAACTATGATGGAGACACCATCCTTCACCATGCCATTTGGAGAGAATTCTTGGATTTGGCAATTATAATAATTCATTGCTATCCTGAACTTGCGAAAACACCAAACAAAGATGGAGCCACACCTCTCAAAGTTCTTGCTCGCAAACCTTCGGCCTTCAAGAGTGGAACCAATCTCCCATGGTGGAAACAAATTCTATATTATGGTATTCTTGTAGAACCTCTAGATGCTGTGAAAGCTATAAAATCCTACACGGAGAAAGTTGAAAAAATTGATGACCATGAACAAAAAGATATTTCAGTGAGTATACAGTCAGTAAATGAAGCCAAGAAAGCACAGATTTTCGTGGAACGAAAGTATGCCACATCTGTTCGATTTGTAAAGAGTGCTGTTCGATTTGCATTCAAATGCCTCAGCCTTTCAGGATTGGGCGTCACTGCACAAGATTTATCATCATTTTTCTGA 1023 0.4242 MSTLESPPRLVSQESAPTLVSQESSTIIEGTEEVRSGDEISLFRGCVLEGRWEFVIPAYRNESEFHKIRINESRGTALHVAVNDGKVELVNILVGSILSHEGREVVRSNSALRSTDERGDTPLHLAASRGFISMIKCIIGENGERKDLIRVRNNRGETPLFRAVLTSQTKAFVYLYNVSKGLEVPLKNYDGDTILHHAIWREFLDLAIIIIHCYPELAKTPNKDGATPLKVLARKPSAFKSGTNLPWWKQILYYGILVEPLDAVKAIKSYTEKVEKIDDHEQKDISVSIQSVNEAKKAQIFVERKYATSVRFVKSAVRFAFKCLSLSGLGVTAQDLSSFF 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g00740 340 Gene3D - 58 292 IPR036770 -
Viun6g00740 340 PANTHER NO MECHANORECEPTOR POTENTIAL C, ISOFORM D-RELATED 70 253 - -
Viun6g00740 340 ProSiteProfiles Ankyrin repeat profile. 118 139 IPR002110 GO:0005515
Viun6g00740 340 FunFam Uncharacterized protein 40 269 - -
Viun6g00740 340 ProSiteProfiles Ankyrin repeat region circular profile. 118 139 - -
Viun6g00740 340 SMART ANK_2a 118 147 IPR002110 GO:0005515
Viun6g00740 340 SMART ANK_2a 190 219 IPR002110 GO:0005515
Viun6g00740 340 SMART ANK_2a 155 184 IPR002110 GO:0005515
Viun6g00740 340 SMART ANK_2a 73 102 IPR002110 GO:0005515
Viun6g00740 340 Pfam Ankyrin repeats (3 copies) 78 177 IPR002110 GO:0005515
Viun6g00740 340 SUPERFAMILY Ankyrin repeat 48 256 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g00740 Viun-Chr6 17159870 17162139 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g00740 114 233 Miscellaneous Gene Families AT2G31820 29.032 2.52e-06 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g00740 - - vun:114188472 670.233
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun6g00740 6 17159870 17162139 Viun6g00740 6 17159870 17162139 ECH