Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g00706 ATGAAGCACCCAAAACCCCAAACGCAAACAAACCCAACACCATCACCCTCATCAAGATCTTCATCCTCGTCTTCTTCACTCTCATCGCACCTTGCTATGGTGGAGCTCAAGCAGAGGATCCTCACTTCCCTCTCCAAGCTCTCCGACCGCGACACGCACCAGATCGCGGTTGAGGACCTCGAGAAGACCATCGCTGCGCTGTCGCCGGACGCCATTCCCATGATCCTTAACTGTCTCTACGATGCCGCCACCGACCCCAAGCCCGCCGTCAAGCGGGACGCGCTGCGCCTCCTTGCCGCCGTCTGCGCTGCCCACGCCGACGCCGCGGCGGCGCACCTCACCAAGATTATCGGGCATGTCGTGCGCCGCCTCAAGGATGCCGACTCTGCCGTTCGCGACGCCTGTAGGGACACTGTCGGCGCGCTGGCCGCGCAGTATCTGAAGGGCGACGGCGGCGGAGGGGGGGTTGGGACGGTGGTGGGGCTGTTCGTGAAGCCGCTTTTTGAGGCCATGGGGGAGCAGAACAAAGGGGTTCAGGCAGGCGCGGCGGTGTGCATGGCGAAGATGGTGGAGTGTGCTGGCGGCGGAGGGGAGGCACCGGTGCCGGCGTTCCAGAAACTGTGTCCGAGGATCTGCAAGCTGCTTAACAGTCCTAATTTCATGGCTAAGGCGGCGATTTTGCCGGTGGTTTCCAGCTTGTCACAGGTTGGAGCGATTGCACCACAAAGCTTGGAACATTTGCTGCCTAGCATCCATGAATGTCTTTCTAGTACGGATTGGGCAACACGTAAAGCAGCAGCTGAGGCATTAAGTTCATTGGCATTGCATTCAAGTAGTTTGGTTACTGATAAAGCAGCACCTACACTGGCAGTACTTGAGGCTTGCCGATTTGACAAGATAAAACCTGTAAGAGATAGCATCAATGAGGCATTGCAATTGTGGAAAAAGATCACAGGGAAAGGAGATGGGTCTCCTGATGATTCAAAGCCCTCGTCTGATGGTGGGAATGAATCAGCTATTTCGTCAGAGACAAGTGACCCAAAAAAAGTAAATCTTGATGAGAGGAAGAATGATTCGTCAGTAAAAGATTCATCAACTAGTTCTTCAAATCTGGATTCAACTTCTAAGGCCAAAGCAGCTGGCATCTCTGAGAAGGCGGTTGTAATACTGAAAAAGAAGGCACCAGCCTTATCTGATAAAGAACTAAATCCAGAATTTTTCCAAAAACTTGAAAGAAGGGGTTCAGATGATTTACCAGTGGAAGTTGTTCTTCCTCGGAGAGGCCTCAATTCTTCTAACTCCAACAACGAGGAAGAGTCAGAGGCAAATGTTAAAGATTCAAAAGATAGAACAAGTTCTGTTGGAAACATCACTAATGATGATTTTCATGGATCCTTAAGTAATAAATATCGTATCTTTGAGAGAGGCAGTGATGGAAATTCCAAACAAAGGAATTATGATGATTTTGGACATGACAGATACGCTGAAAGAAGGACGAACTCAAAAGAACTGAGGACTAAGGCATATGATACTGATGATAGGACTGAAAATGATCAGAGGGAGGGTTCTGCCAATCTTGCAGGTTTTTCTAAAACTGATGGTCAGTCTGAAGTACCCTTCTCCAATAACAGAGGAAATTGGTTGGCCATCCAGAGGCAGTTGCTGCAACTGGAAAGGCAACAGGTTCATCTAATGAATATGCTTCAGGATTTCATGGGTGGATCGCATGATAGTATGGTGACTCTAGAGAATAGAGTACGTGGTCTTGAGAGAATTGTTGAAGACATGTCTCGTGATTTATCCATATCATCAGGTCGTAGAAACTTTACTGGGTTTGAAGGATCATCTAGCAGGCCATCTAATAAGTATAATGGTTTTAGTGACTACAATTCCAAGTATGGAAGAGGTGGTGATGGACGCATCCAATTTGGTGAAAGATTTTCCCAATCTGATGGAAATGCTCTGGGAATGAGGGGAAGAGGGCCATCTTGGAGATCTGACATGTCTGAAGGGTGGGATCTTCCTGGTTATGGTGCTTCTAGAAATAATAGCCAGGTTTCCTCAAGGAGGGCTTTTGGTGGTAGTTCTGCTGATGGAAGATCACCGAAATCTGTGCATGAGAGTGATCAATCTGGAAACAGGAGAGCTTGGGATAAAGCAGCACTGCCCATCCGGCTTGGTGAGGGACCATCTGCCAGAAGTGTCTGGCAAGCTTCCAAGGATGAAGCTACCTTGGAAGCAATTCGTGTTGCCGGTGAGGACAATGGAGCATCTCGAGCAACAAGGGTAGCAATCCCTGAAATGACCGCAGAAGCTCTGGCTGATGACAATGTTGGGCAAGAGAGGGATGCCATCTGGACTTCTTGGACCAATGCAATGGATGCCCTTCAAGTAGGAGACACAGATTCAGCCTTTGCAGAAGTATTGTCCACTGGTGATGATATTTTGCTTGTAAAGCTAATGGACAGAACAGGTCCTGTAATTGACCAACTTTCAAGTGAAGTTGCATGTGAAATTGTGAATGCCATTGGGCAATTCATGGTGGACCAGAACATGTATGACATCTGTTTGTCTTGGATTCAACAGTTGCTGGAGATAGTATTGGAAAATGGAGCCGATACCTTTGGCATCCCCATGGAAGTGAAGAAAGAGCTATTACTGAATTTACATGAAGCTTCTACAGATACAACTGAGGCCTGGGAAGGGGTACATCCAGAGCAGCTTTTATTGCAGTTGGCATCAGCCTGGGAAATTGATCTACAACAGCATGACAAATAG 2778 0.4806 MKHPKPQTQTNPTPSPSSRSSSSSSSLSSHLAMVELKQRILTSLSKLSDRDTHQIAVEDLEKTIAALSPDAIPMILNCLYDAATDPKPAVKRDALRLLAAVCAAHADAAAAHLTKIIGHVVRRLKDADSAVRDACRDTVGALAAQYLKGDGGGGGVGTVVGLFVKPLFEAMGEQNKGVQAGAAVCMAKMVECAGGGGEAPVPAFQKLCPRICKLLNSPNFMAKAAILPVVSSLSQVGAIAPQSLEHLLPSIHECLSSTDWATRKAAAEALSSLALHSSSLVTDKAAPTLAVLEACRFDKIKPVRDSINEALQLWKKITGKGDGSPDDSKPSSDGGNESAISSETSDPKKVNLDERKNDSSVKDSSTSSSNLDSTSKAKAAGISEKAVVILKKKAPALSDKELNPEFFQKLERRGSDDLPVEVVLPRRGLNSSNSNNEEESEANVKDSKDRTSSVGNITNDDFHGSLSNKYRIFERGSDGNSKQRNYDDFGHDRYAERRTNSKELRTKAYDTDDRTENDQREGSANLAGFSKTDGQSEVPFSNNRGNWLAIQRQLLQLERQQVHLMNMLQDFMGGSHDSMVTLENRVRGLERIVEDMSRDLSISSGRRNFTGFEGSSSRPSNKYNGFSDYNSKYGRGGDGRIQFGERFSQSDGNALGMRGRGPSWRSDMSEGWDLPGYGASRNNSQVSSRRAFGGSSADGRSPKSVHESDQSGNRRAWDKAALPIRLGEGPSARSVWQASKDEATLEAIRVAGEDNGASRATRVAIPEMTAEALADDNVGQERDAIWTSWTNAMDALQVGDTDSAFAEVLSTGDDILLVKLMDRTGPVIDQLSSEVACEIVNAIGQFMVDQNMYDICLSWIQQLLEIVLENGADTFGIPMEVKKELLLNLHEASTDTTEAWEGVHPEQLLLQLASAWEIDLQQHDK 925
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g00706 925 Gene3D - 150 304 IPR011989 -
Viun6g00706 925 Gene3D - 35 149 IPR011989 -
Viun6g00706 925 MobiDBLite consensus disorder prediction 521 538 - -
Viun6g00706 925 MobiDBLite consensus disorder prediction 347 361 - -
Viun6g00706 925 MobiDBLite consensus disorder prediction 418 461 - -
Viun6g00706 925 SMART TOG_3 65 306 IPR034085 -
Viun6g00706 925 MobiDBLite consensus disorder prediction 640 723 - -
Viun6g00706 925 MobiDBLite consensus disorder prediction 475 520 - -
Viun6g00706 925 MobiDBLite consensus disorder prediction 329 346 - -
Viun6g00706 925 FunFam Microtubule-associated protein TORTIFOLIA1 150 309 - -
Viun6g00706 925 MobiDBLite consensus disorder prediction 362 377 - -
Viun6g00706 925 MobiDBLite consensus disorder prediction 678 694 - -
Viun6g00706 925 SUPERFAMILY ARM repeat 41 870 IPR016024 -
Viun6g00706 925 PANTHER MICROTUBULE-ASSOCIATED PROTEIN TORTIFOLIA1 25 893 IPR033337 GO:0005874|GO:0008017
Viun6g00706 925 FunFam Microtubule-associated protein TORTIFOLIA1 29 149 - -
Viun6g00706 925 MobiDBLite consensus disorder prediction 1 28 - -
Viun6g00706 925 MobiDBLite consensus disorder prediction 317 377 - -
Viun6g00706 925 MobiDBLite consensus disorder prediction 473 538 - -
Viun6g00706 925 Coils Coil 579 599 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g00706 Viun-Chr6 17054229 17062352 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g00706 - - gmx:100804845 1562.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun6g00706 6 17054229 17062352 Viun6g00706 6 17054229 17062352 ECH