Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g00702 ATGGCTTCCATCTCATGCATCACCCACCACCCCGTCACTTCCAAGCTCAAAAATTTCTTCCCTTCACCTCACGTTTCTGCCTCAGACTTGGCTTCAAGGTTTCTGGGCACAAAAAAAAGTGTTGGGTGGCTCAGCCTCACCTCTAGAATTGGCCCCTCCAACGGCTCCAGAGCCACGTGCTGGTTCAGGTTCGGGAAGAACGGTGTTGATGCCGAAGGTGCTGGCATTTATGGCAGCCAAAGCCGTGATGACTTTGACAGAGATGATGTGGAGCAGTACTTCAACTACATGGGGATGCTTGCAGTAGATGGAACCTATGATAAAATGGAAGCTCTTCTAAACCTTAAACTCCACCCTGTGGACATCCTTCTCCTATTAGCTGCATCAGAAGGTGACAAGCCAAAAATTGAAGAACTCCTGAGAGCTGGAGCAAAATATGATGTAAAAGATGGAGAGGGTAGAACGGCATTGGATCGAGCCAACGAAGAAATTAAAGAATTCATTCTTAATTTTTCAGTGCAGAGGGCATGA 531 0.4708 MASISCITHHPVTSKLKNFFPSPHVSASDLASRFLGTKKSVGWLSLTSRIGPSNGSRATCWFRFGKNGVDAEGAGIYGSQSRDDFDRDDVEQYFNYMGMLAVDGTYDKMEALLNLKLHPVDILLLLAASEGDKPKIEELLRAGAKYDVKDGEGRTALDRANEEIKEFILNFSVQRA 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g00702 176 FunFam Protein LHCP TRANSLOCATION DEFECT 84 175 - -
Viun6g00702 176 PANTHER PROTEIN LHCP TRANSLOCATION DEFECT 1 176 IPR044242 GO:0006886|GO:0009570|GO:0090391
Viun6g00702 176 Gene3D - 107 175 IPR036770 -
Viun6g00702 176 SUPERFAMILY Ankyrin repeat 99 170 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g00702 Viun-Chr6 17018303 17022883 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g00702 - - gmx:100499940 307.375
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun6g00702 6 17018303 17022883 Viun6g00702 6 17018303 17022883 ECH