Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g04062 ATGGAGTTAAATATCCTTGAGTCAGAAACACATCAAAATAGGAGGAGAAAGAAATCTACTGTTTGGGAACACTTCACTGTGAAAACTGATGGACCTGGATGTGCCAGGGCTTACTGTAAAAGATGCCAAAAGTCATTTGCTTATCTCAAGGATTCAAAACAATCTGGCACCAGTCATCTCAAGAGACACATTGCTCTGGGAATCTGTCAGAAAAATAAAAAATCCCCGTGTTCCAAAACTGATGCAGATCCACCTAAGAAACGAGCAAGGGCAAAACCTTACATTGCTGCTATCTCATTTGATCAGGAGCGTTGCAACAGTAAGATGGCCAAAATGATTATTTTACATGACTATCCACTTCATATTGTAGAACACCAAGGTTTCATTGATTTTGTACGGACACTACAACCCCAGTTCAATCCACTGAGCCTTAATGCTCTTCAAGGGGATTGTGTTGCTATGTACCTCAGAGAGAAGCAAAACCTATTGAATCTTATTGATGGGATTCCTGGACGAGTCAACCTCACCTTAGACTTATGGACTTCAAACCAAACATCAGCCTATGTTTTTCTTCGAGGTCACTTCATTGATGGTGATTGGAATTTACATCATCCTATTCTTAATGTATTCATGGTACCATTTCCTGATTCTGACGGTTCCTTAAATCAAGCTATAGTGAAATGCCTGAGCAATTGGCATTTAAAGGGTCGGCTATTTACTCTTGCACTTGATAAATTCTTCTCCACTGAGACTTTGATGGGAAATCTGAGAAGTTTCCTCTCTGTTAATAACCCTGTGATTCTCAATGGTCAGTTTTTAAGCCAGAACTGTTATGCTCGTGTACTTAGTCGCCTTGCATCAGATGCTCTATCAGCTATGAGAGAAACAATCAATAAAGTTCGCGAGAGTGTGAAGTATGTGAAATCTTCTAAATCAAATGAAGCAATTTTTTTGAAGCTGAGGCACCAACTTCAAGTCCCTAGTACAATGGACCTTGTCATCGATGACCAAAATAAATGGGACACAATTTACCATATGCTTGTAGCTGCTTGCAAATTAAAGGAAGCTTTTGTTTCCTTTGACGCCTTTGATCCTGATTTCAGAATGACTTTAACAATGGATGACTGGAAGCATGTGGAAACTCTATGTAGATATTTGAATTACCTGTATGATGCAGCTAACATTTTAACTGTTCAACCGTACCCAACTGCAAATGTATTTTTTCTTGAAGTGTCAAAACTTCAAGTGGTGTTGACTTGTGCAGCCTTAAGCCAGGATCATTTCTGCAGGTGTTTGATTATGCCTTTGCAAAAGAAGTTTGATCAATATTGGAGAGAAAGCTGTTTCATCTTGGCTGCTGCTGTAGCCATGGATCCAAGATACAAAATGAAATTCGTGGAATCCACCTTCGCTAAGATATTTGGTGAGAATGCTGAGTACTGGACAAGAGTTGTTGGGGATGGTCTTAATGAACTGTTCCTCGAATATAATATCATACAAGTGCTTCCTTTTACAGCAACAAATGATAATGAAGGGAATGAGACTATGATAAAGACTGAGCCATTTGAAGAAGGGGCATTTGATGCATCTCTTTTTGCGGGTGATGATGGACTTTCTGACATCGAATTTTATATATCTGATCTAACATGTAACCAGCAATTTAAGTCTGAATTAGATGAGTATCTTGAAGAGCCTCTTGAGACAAGAGTACAAGAATTTGATGTTCTGAGCTGGTGGAGAATAAACGAATTGAAGTACCCAACATTGTCTAGACTAGCATCAGATATTTTGTGTGTGCCAGTATCCACCCTCTCAGGAGATGCTGTTTTTGATACAGAAATTAGAAAAATGGATAACTACCGGAGTTCATTAGATTCCTTGACTCTTGAGGCCCTTATTTGTACCAAGGACTGGTTCCAGTATAATTCATTACCACCCATCAGTGTTTCAAATGCACTTGTCAAAGTTGAGTGTTAG 1977 0.39 MELNILESETHQNRRRKKSTVWEHFTVKTDGPGCARAYCKRCQKSFAYLKDSKQSGTSHLKRHIALGICQKNKKSPCSKTDADPPKKRARAKPYIAAISFDQERCNSKMAKMIILHDYPLHIVEHQGFIDFVRTLQPQFNPLSLNALQGDCVAMYLREKQNLLNLIDGIPGRVNLTLDLWTSNQTSAYVFLRGHFIDGDWNLHHPILNVFMVPFPDSDGSLNQAIVKCLSNWHLKGRLFTLALDKFFSTETLMGNLRSFLSVNNPVILNGQFLSQNCYARVLSRLASDALSAMRETINKVRESVKYVKSSKSNEAIFLKLRHQLQVPSTMDLVIDDQNKWDTIYHMLVAACKLKEAFVSFDAFDPDFRMTLTMDDWKHVETLCRYLNYLYDAANILTVQPYPTANVFFLEVSKLQVVLTCAALSQDHFCRCLIMPLQKKFDQYWRESCFILAAAVAMDPRYKMKFVESTFAKIFGENAEYWTRVVGDGLNELFLEYNIIQVLPFTATNDNEGNETMIKTEPFEEGAFDASLFAGDDGLSDIEFYISDLTCNQQFKSELDEYLEEPLETRVQEFDVLSWWRINELKYPTLSRLASDILCVPVSTLSGDAVFDTEIRKMDNYRSSLDSLTLEALICTKDWFQYNSLPPISVSNALVKVEC 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g04062 658 Pfam Domain of unknown function (DUF4413) 399 496 IPR025525 GO:0003677
Viun5g04062 658 SUPERFAMILY Ribonuclease H-like 166 641 IPR012337 -
Viun5g04062 658 PANTHER BED FINGER-RELATED 149 643 IPR045259 -
Viun5g04062 658 Pfam hAT family C-terminal dimerisation region 557 639 IPR008906 GO:0046983
Viun5g04062 658 SUPERFAMILY beta-beta-alpha zinc fingers 19 65 IPR036236 -
Viun5g04062 658 ProSiteProfiles Zinc finger BED-type profile. 16 76 IPR003656 GO:0003677
Viun5g04062 658 SMART bed5 16 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g04062 Viun-Chr5 48110728 48115169 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g04062 - - gmx:106796308 1152.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun5g04062 5 48110728 48115169 Viun5g04062 5 48110728 48115169 ECH
Viun5g04062 5 48110728 48115169 Viun10g02761 10 40586969 40592014 PCT