Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g04050 ATGGCTTCTGACGCTGCTGCGGAAAACATGAACGAGGTGGGACCTGGATACGTCTTCAAAGAAGAGATCCATCTCACCGTCCTCAAAACCTCTCTCTTCTTCGCCGGCGACGGCTTCACCGTCTACGACTGCAAGGGTCAACTCGTCTTCCGAGTTGACTCTTACGGACCCGACACTCGCGACAGAGACGAACTCGTTCTCATGGATCCTAACGGACGCTGCCTCCTCACTGTTCGTCGGAAGAGACCGAGTTTGCATCAACGGTGGGAGGGCTTCAAAGGGGAGAGGATGGACGGTGATAAACCTATCTTCAGCGTGAAGAGAGCGTCGATCATCGGAAGGTCGCGCGCGAGTTTGACGGTGGAGATGTACGATAACCCGGGTGAGGAGTACCAGATCGAAGGGTGTTTCTCTCAGCGATGCTGCACGGTGTTCAATGTGACCAAGGAATCTGTGGCTGAGATTCGACGTAAGGTGGACCCCACCACCAGTGTTGTGCTTGGGAAGGAAGTGTTCTCTCTGTGTGTTAAGGCTGGGTTTGACGCGGCTTTTGCCATGGGTTTTGTGCTGGTCCTGGATCAGATCAACGGTGAGGATTACGCTGATAGTGGTGCGACCGCGGAGCCTGCGGTGCACCCAACCACAGATGATTGA 654 0.5474 MASDAAAENMNEVGPGYVFKEEIHLTVLKTSLFFAGDGFTVYDCKGQLVFRVDSYGPDTRDRDELVLMDPNGRCLLTVRRKRPSLHQRWEGFKGERMDGDKPIFSVKRASIIGRSRASLTVEMYDNPGEEYQIEGCFSQRCCTVFNVTKESVAEIRRKVDPTTSVVLGKEVFSLCVKAGFDAAFAMGFVLVLDQINGEDYADSGATAEPAVHPTTDD 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g04050 217 Pfam LURP-one-related 12 191 IPR007612 -
Viun5g04050 217 PANTHER - 24 197 IPR007612 -
Viun5g04050 217 SUPERFAMILY Tubby C-terminal domain-like 12 196 IPR025659 -
Viun5g04050 217 Gene3D - 13 201 IPR038595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g04050 Viun-Chr5 48043926 48045171 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g04050 - - gmx:100527456 404.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun5g04050 5 48043926 48045171 Viun5g04050 5 48043926 48045171 ECH
Viun5g04050 5 48043926 48045171 Viun10g02748 10 40526965 40528108 PCT