Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g03977 ATGAGTCATGCACATTCTCATACTGGTTCTGGCAGCAGAATGACTCGAGGTACTTTTGAGTTTGGGAAGACATATGTTGTGAGACCCAAAGGTAAACACCAAGCCACTATAATTTGGTTGCATGGTCTTGGTGACAATGGTTTGAGCTCATCTCAGCTTTTGGAATCCCTTCCACTTCCAAATATAAAATGGATTTGTCCAACTGCTCCCACCCGTCCTGTGGCAATACTTGGTGGTTTTCCCTGCACAGCATGGTTTGATGTGGGAGAACTTTCAGAAGATGGCCCAGATGATTGGGAGGGTTTGGATGCCTCAGCAACACACATTGCTAACTTGTTGTCAACAGAGCCAGCTGATGTGAAAGTTGCTATTGGAGGGTTCAGCATGGGTGCTGCAATAGCCCTGTACTCTGCAACTTGTTTTGCCATAGGAAGGTATGGAAATGGCATTCCCTACCCTCTCAATCTAAGAACAGTGGTTGGACTCAGTGGTTGGCTTCCAGGATCAAGGAGCTTAAGGAACAAGATAGAAGTATCACATGAAGCAAGAAGACGAGCAACTTCATTACCCATTTTGTTGTGCCATGGAATCAGTGATGATGTGATCCTTTACAAATATGGTGAAAAATCAGCTCAATCTTTATGCTCATCAGGGTTTCGATATGTTGCATTCAAATCCTATGATGGGCTTGGTCATTACACAATTCCCAGAGAGATGGATGAAGTTTGCACTTGGCTTAGTTCAAAGTTGGGGCTTGAAGGGTCCTCATAA 771 0.4423 MSHAHSHTGSGSRMTRGTFEFGKTYVVRPKGKHQATIIWLHGLGDNGLSSSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSEDGPDDWEGLDASATHIANLLSTEPADVKVAIGGFSMGAAIALYSATCFAIGRYGNGIPYPLNLRTVVGLSGWLPGSRSLRNKIEVSHEARRRATSLPILLCHGISDDVILYKYGEKSAQSLCSSGFRYVAFKSYDGLGHYTIPREMDEVCTWLSSKLGLEGSS 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g03977 256 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 1 255 - -
Viun5g03977 256 Pfam Phospholipase/Carboxylesterase 25 247 IPR003140 GO:0016787
Viun5g03977 256 Gene3D alpha/beta hydrolase 14 251 IPR029058 -
Viun5g03977 256 SUPERFAMILY alpha/beta-Hydrolases 25 250 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g03977 Viun-Chr5 47672657 47675453 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g03977 9 255 Acyl Lipid Metabolism Gene Families AT3G15650 76.923 8.48e-131 369
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g03977 K06130 - gmx:100781212 501.901
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun10g02715 10 40388098 40391597 Viun5g03977 5 47672657 47675453 ECH
Viun9g00886 9 6742138 6750511 Viun5g03977 5 47672657 47675453 ECH
Viun5g03977 5 47672657 47675453 Viun5g03977 5 47672657 47675453 ECH
Viun5g03977 5 47672657 47675453 Viun10g02715 10 40388098 40391597 PCT