Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g03970 ATGGACGTTGTTCTTCAAACCAGAGGCCTTCTCTCTCTCCCCACAAACCCCATTAACAAGGTTTCACTTTTACACCCCTCCCAAGGTTTAAGACTCAGGCTTTCCTCACCAAAGCCAAAAATCCTTGCTGCCTCTTCTGCTTCCTTCAATGGGTTCCAAAAACACTCGCCAAAACCCAATGTCTTTGCCCAAAGGGACAAAAATAAAAATTTGTTCTTGTGCAGGGCTGAGGCTGCAGCAGCTGCGGCCTCCTTTGGGGAAACAGAATCTGAGAAACCCAAGTTTTTCGGTGTTGATGTTGCCACCTTGAAGAAGATTGTGCCTTTGGGGATGATGTTCTTCTGTATCCTCTTCAACTACACCATCTTGAGAGACACAAAGGATGTGTTGGTCGTGACGGCCAAAGGAAGCAGTGCTGAAATTATACCGTTTCTCAAAACTTGGGTGAACCTTCCCATGGCCATTGGCTTCATGTTGTTATACACTAAGTTGGCTAATGTGTTGTCCAAACAAGCTCTCTTTTACTCTGTAATCCTTCCCTTCATTGCCTTCTTTGGGGCGTTTGGTTTTGTTCTGTACCCTCTCAGCAATTATATCCACCCGGAGGCGTTTGCGGATAAGCTTCTTAACATCCTTGGCCCTCGGTTTCTTGGTCCTCTTGCAATTATGAGGATTTGGAGCTTTTGTTTGTTCTATGTCATGGCTGAATTGTGGGGGAGTGTTGTAATTTCGGTGCTGTTTTGGGGATTTGCCAATCAGATAACAACTGTTGATGAAGCAAAACGATTCTATCCTTTATTTGGACTTGGTGCCAATGTAGCCCTTGTGTTCTCTGGTCGAACAGTGAAATACTTTTCTAATCTTAGGAAGAATTTAGGTCCTGGAGTTGATGGTTGGGCCGTGTCTCTAAAAGGAATGATGAGCATAGTTGTGGGCATGGGACTCGCAATCTGTGTCATATATTGGTGGGTGAATAACTATGTTCCACTTCCCACACGTAGCAAGAAGAAGAAGGAGAAGCCCAAAATGGGAACAATGGAGAGCATAAAATTTTTGGTGTCTTCAAAATACATAAGGGATCTTGCCACTTTAGTGGTTGCATACGGAATTAGCATTAATCTTGTTGAGGTTACATGGAAATCAAAGCTCAAAGCTCAGTTTCCTAGCCCCAATGAGTACTCATCTTTCATGGGAGACTTTTCAACTGCAACTGGAATTGCTACATTCACAATGATGCTTTTAAGCCAATTTATATTTGACAAATATGGATGGGGAGTTGCTGCCAAGATCACCCCCACTGTTCTGCTTTTAACAGGAGTTGGTTTCTTCTCTCTAATATTATTTGGCGGCCCAATTGCTCCTGTTATTGCAAATTTTGGCATGACTCCACTGCTAGCTGCTGTATACGTGGGTGCATTGCAGAACATATTCAGCAAAAGTGCTAAGTACAGTTTATTCGATCCCTGCAAAGAAATGGCCTACATACCCTTGGATGAGGATACCAAGGTGAAAGGGAAGGCAGCCATTGATGTAGTGTGCAACCCATTGGGAAAATCTGGTGGAGCTCTAATTCAGCAGTTCATGATCTTAAGTTTTGGTTCACTGGCTAATTCAACTCCATATCTGGGAGGGGTGCTTCTGGTGATTGTTCTTGCCTGGTTATCAGCGGCGAAGTCTCTTGATTCCCAGTTTTCTACTTTGCGTAGAGAAGAAGAGCTTGAGAAAGAGATGGAGAGAGCAGCTGCTGTTAAGATACCAGTGGTGGCCAAGGATGAAGATGGAAATGGTTCTCTTGCAAGTGTTCCACTATTGAATCCAACAACTGGTGGTGACTCAAGTACATTGAATTGA 1851 0.4371 MDVVLQTRGLLSLPTNPINKVSLLHPSQGLRLRLSSPKPKILAASSASFNGFQKHSPKPNVFAQRDKNKNLFLCRAEAAAAAASFGETESEKPKFFGVDVATLKKIVPLGMMFFCILFNYTILRDTKDVLVVTAKGSSAEIIPFLKTWVNLPMAIGFMLLYTKLANVLSKQALFYSVILPFIAFFGAFGFVLYPLSNYIHPEAFADKLLNILGPRFLGPLAIMRIWSFCLFYVMAELWGSVVISVLFWGFANQITTVDEAKRFYPLFGLGANVALVFSGRTVKYFSNLRKNLGPGVDGWAVSLKGMMSIVVGMGLAICVIYWWVNNYVPLPTRSKKKKEKPKMGTMESIKFLVSSKYIRDLATLVVAYGISINLVEVTWKSKLKAQFPSPNEYSSFMGDFSTATGIATFTMMLLSQFIFDKYGWGVAAKITPTVLLLTGVGFFSLILFGGPIAPVIANFGMTPLLAAVYVGALQNIFSKSAKYSLFDPCKEMAYIPLDEDTKVKGKAAIDVVCNPLGKSGGALIQQFMILSFGSLANSTPYLGGVLLVIVLAWLSAAKSLDSQFSTLRREEELEKEMERAAAVKIPVVAKDEDGNGSLASVPLLNPTTGGDSSTLN 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g03970 616 Pfam TLC ATP/ADP transporter 92 564 IPR004667 GO:0005471|GO:0006862|GO:0016020
Viun5g03970 616 MobiDBLite consensus disorder prediction 600 616 - -
Viun5g03970 616 MobiDBLite consensus disorder prediction 592 616 - -
Viun5g03970 616 NCBIfam NTP/NDP exchange transporter 99 564 IPR004667 GO:0005471|GO:0006862|GO:0016020
Viun5g03970 616 PANTHER - 3 598 IPR004667 GO:0005471|GO:0006862|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g03970 Viun-Chr5 47594704 47598163 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g03970 1 599 Organic Solute Cotransporters AT1G80300 81.938 0.0 976
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g03970 K03301 - gmx:100775892 1104.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun5g03970 5 47594704 47598163 Viun5g03970 5 47594704 47598163 ECH
Viun5g03970 5 47594704 47598163 Viun10g02709 10 40342035 40345679 PCT