Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g03862 ATGGCACCCAATGGAGAGTGTTTGCCTAGTTCAATCTCTAGAAACAGCAGCAACATGTGCAAACCTCCAAGGCTTTCAAATGATCACATTCAAAGAACGATCTCAGACATCTCGTTTGAGCTAACCAAGGAAGGGATTGATCTGTCGCTTCAACCTATAACTGAGGTTATGGATGCCAAGTGTGAGTGCTGTGGAATGTGCGAGGAGTGCACTCCTGAGTACATAGAGCGTGTGCGTGAGAAGTTCTTGGGGAAGTGGGTGTGTGGTTTGTGTGCTGAGGCAGTGAAGGAAGAGTTGGAGAAAAATGGTGGGAAGAAGAAGGAAGAGGCATTGAGTTCACACATGAGTGCATGTGTGAGGTTCAACAAATATGGAAGGGCTTTCCCAGTTCTGTTCCAAGCTGAGGCCATGAAAGAGATGCTCAAAAGGAACAAAATAGATAACAGAAGGGCCAAGTCCTTCAACCCTAGAGACAAAGGAACACAAAACAAAGGAATTGCTAGAAGTTCAAGTTGCATTCCAGCTATCACAAGAGAGATGAATGGTCTCACAATGGCCAATTAG 564 0.4521 MAPNGECLPSSISRNSSNMCKPPRLSNDHIQRTISDISFELTKEGIDLSLQPITEVMDAKCECCGMCEECTPEYIERVREKFLGKWVCGLCAEAVKEELEKNGGKKKEEALSSHMSACVRFNKYGRAFPVLFQAEAMKEMLKRNKIDNRRAKSFNPRDKGTQNKGIARSSSCIPAITREMNGLTMAN 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g03862 187 MobiDBLite consensus disorder prediction 8 25 - -
Viun5g03862 187 MobiDBLite consensus disorder prediction 1 25 - -
Viun5g03862 187 PANTHER OS01G0745000 PROTEIN 53 180 IPR012876 -
Viun5g03862 187 Pfam Protein of unknown function (DUF1677) 56 143 IPR012876 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g03862 Viun-Chr5 47069750 47070790 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g03862 - - gmx:100785884 314.309
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun5g03862 5 47069750 47070790 Viun5g03862 5 47069750 47070790 ECH
Viun5g03862 5 47069750 47070790 Viun10g02626 10 39815975 39816927 PCT