Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g03795 ATGGTGATGTGCTTCAAGCTCATAATGTGGAACGTGGTGCTTCTTCTTGTTTGTTCTCTCATTGCTTCTGCTCAGGCCTCAGTGTCGTATGACTCAAAGGCTATCACCATTAATGGCCAGAGAAGGATCCTCATTTCTGGATCCATTCATTACCCAAGGAGCACCCCTGAGATGTGGCCAGATCTTATTCAGAAGGCCAAGGAGGGAGGGTTGGATGTGATTCAGACTTACGTTTTCTGGAATGGGCACGAGCCTTCACCTGGCAAGTATTATTTTGAGGGGAACTATGATCTGGTGAAGTTCATAAAGCTGGTGCAGCAAGCAGGCCTTTATGTTAATCTCAGGATTGGTCCTTATGTGTGTGCTGAGTGGAACTTTGGGGGTTTCCCCGTTTGGCTAAAGTACATTCCAGGAATCAGCTTCAGAACAGACAATGAACCTTTTAAGAATCAAATGCAAAAATTTACCACGAAGATTGTTGATTTGATGAAAGCGGAGAGGTTATACGAGTCTCAGGGAGGTCCAATAATTATGTCACAGATTGAAAATGAATATGGACCTGTAGAGTATGAAATTGGTGCTGCGGGTAAATCTTATACTAATTGGGCAGCAGAGATGGCTATGGGACTTGGTACTGGTGTTCCATGGATCATGTGCAAGCAGGATGATACTCCTGATCCTCTTATTAACACTTGCAATGGCTTCTACTGTGATTATTTCTCTCCAAATAAGGCTTACAAGCCAAAGATGTGGACAGAAGCTTGGACTGGCTGGTTTACGGAGTTTGGAGGTCCAGTTCCTCATCGACCTGCTGAAGACTTGGCATTTTCAGTGGCAAGGTTTCTACAGAAAGGAGGATCATTTGTAAACTATTACATGTATCATGGGGGAACAAACTTTGGTCGAACTGCTGGTGGTCCCTTTATTGCAACAAGCTATGATTATGATGCACCACTTGATGAATATGGATTGCTCAGGCAACCAAAGTGGGGTCATCTGAAGGATTTACACAGAGCAATAAAAATGTGTGAACCAGCCTTAGTATCAGGAGATCCTACTGTAACAAATATTGGAAACTATCAAGAGGCTCATGTGTTTAAAGCAAAGTCAGGAGCTTGTGCTGCATTCCTTGCAAACTATAACCCAAAATCTTATGCAAAAGTGGCCTTTGGAAGTATGCATTACAACTTGCCTCCTTGGTCTATAAGCATTCTTCCTGACTGCAAGCACACTATTTATAACACTGCAAGGGTTGGTTCTCAGAGTGCCCAGATGAAGATGACTGGTGTTCCTATTCATGGTGGACTCTCTTGGCTATCATTCAATGAAGAAACTACTACTACTGAGGATAGTTCCTTCACCATGACTGGCCTGTTAGAGCAATTAAATACAACAAGAGATTTATCTGACTACTTGTGGTACTCTACAGATGTTGTGCTTGATTCCAGAGAAGGGTTTCTGACAAACGGAAAGGATCCTATTCTTACTGTGTTTTCTGCTGGGCATGCTCTGCATGTTTTTATAAATGGTCAACTATCAGGAACTTCATATGGAAGCTTAGAATTCCCTAAACTAACATTTAGTCAAGGAGTGAAGCTAAGAGCTGGTGTTAACAAGATCTCTCTTCTGAGTGTTGCAGTTGGACTCCCGAATGTTGGACCTCATTTTGAAACATGGAATGCTGGTGTTCTTGGACCAATATCATTAAGTGGTCTCAACGAAGGGAGAAGGGACTTGTCTTGGCAGAAATGGTCTTACAAGGTTGGTCTTAAAGGTGAAACCTTGAGTCTCCACTCTCTTAGTGGAAGTTCCTCAGTGGAGTGGATCGAGGAATCTTTATTTTCTAGCAGACAGCCTTTGACTTGGTACAAAACAAGTTTCGATGCACCAGCTGGGACTGCACCGTTGGCTTTAGACATGGACAGCATGGGAAAAGGTCAAGTGTGGTTAAATGGACAGAATCTTGGTCGCTACTGGCCTGCTTATAAAGCTTCTGGTACCTGTGATTATTGTGACTATGCTGGAACTTATAATGAGAATAAATGCAGAAGCAACTGTGGCGAGGCCTCTCAAAGATGGTATCATGTTCCTCAGTCATGGCTAAAACCTACAGGAAATTTATTGGTTGTGTTTGAAGAGCTTGGTGGAGATCCCAATGGAATCTTTTTGGTTAGAAGGGATATAGATAGTGTGTGTGCTGATATTTATGAGTGGCAGCCTAACCTTATAAGCTATCAGATGCAAGTTGCTGGAAAACCACCAGTGAGACCAAAAGTTCATTTATCATGTAGTCCTGGACAGAAAATCTCATCCATCAAATTTGCCAGTTTTGGTACTCCACTGGGTTCTTGTGGAAACTTCCATGAAGGAAGTTGCCATGCTCACAAGTCTTATGATGCATTTGAAAGGAATTGTGTTGGACAAAACTGGTGCACAGTAACGGTGTCACCTGAAAATTTTGGAGGAGATCCTTGTCCAAATGTCATGAAGAAACTCTCAGTGGAAGCTATTTGTTCCTGA 2520 0.4258 MVMCFKLIMWNVVLLLVCSLIASAQASVSYDSKAITINGQRRILISGSIHYPRSTPEMWPDLIQKAKEGGLDVIQTYVFWNGHEPSPGKYYFEGNYDLVKFIKLVQQAGLYVNLRIGPYVCAEWNFGGFPVWLKYIPGISFRTDNEPFKNQMQKFTTKIVDLMKAERLYESQGGPIIMSQIENEYGPVEYEIGAAGKSYTNWAAEMAMGLGTGVPWIMCKQDDTPDPLINTCNGFYCDYFSPNKAYKPKMWTEAWTGWFTEFGGPVPHRPAEDLAFSVARFLQKGGSFVNYYMYHGGTNFGRTAGGPFIATSYDYDAPLDEYGLLRQPKWGHLKDLHRAIKMCEPALVSGDPTVTNIGNYQEAHVFKAKSGACAAFLANYNPKSYAKVAFGSMHYNLPPWSISILPDCKHTIYNTARVGSQSAQMKMTGVPIHGGLSWLSFNEETTTTEDSSFTMTGLLEQLNTTRDLSDYLWYSTDVVLDSREGFLTNGKDPILTVFSAGHALHVFINGQLSGTSYGSLEFPKLTFSQGVKLRAGVNKISLLSVAVGLPNVGPHFETWNAGVLGPISLSGLNEGRRDLSWQKWSYKVGLKGETLSLHSLSGSSSVEWIEESLFSSRQPLTWYKTSFDAPAGTAPLALDMDSMGKGQVWLNGQNLGRYWPAYKASGTCDYCDYAGTYNENKCRSNCGEASQRWYHVPQSWLKPTGNLLVVFEELGGDPNGIFLVRRDIDSVCADIYEWQPNLISYQMQVAGKPPVRPKVHLSCSPGQKISSIKFASFGTPLGSCGNFHEGSCHAHKSYDAFERNCVGQNWCTVTVSPENFGGDPCPNVMKKLSVEAICS 839
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g03795 839 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 173 185 IPR019801 GO:0004553|GO:0005975
Viun5g03795 839 FunFam Beta-galactosidase 591 732 - -
Viun5g03795 839 FunFam Beta-galactosidase 292 420 - -
Viun5g03795 839 PRINTS Glycosyl hydrolase family 35 signature 287 302 IPR001944 GO:0004553|GO:0005975
Viun5g03795 839 PRINTS Glycosyl hydrolase family 35 signature 645 661 IPR001944 GO:0004553|GO:0005975
Viun5g03795 839 PRINTS Glycosyl hydrolase family 35 signature 38 55 IPR001944 GO:0004553|GO:0005975
Viun5g03795 839 PRINTS Glycosyl hydrolase family 35 signature 114 133 IPR001944 GO:0004553|GO:0005975
Viun5g03795 839 PRINTS Glycosyl hydrolase family 35 signature 171 186 IPR001944 GO:0004553|GO:0005975
Viun5g03795 839 PRINTS Glycosyl hydrolase family 35 signature 618 632 IPR001944 GO:0004553|GO:0005975
Viun5g03795 839 PRINTS Glycosyl hydrolase family 35 signature 307 323 IPR001944 GO:0004553|GO:0005975
Viun5g03795 839 PRINTS Glycosyl hydrolase family 35 signature 59 77 IPR001944 GO:0004553|GO:0005975
Viun5g03795 839 PRINTS Glycosyl hydrolase family 35 signature 250 265 IPR001944 GO:0004553|GO:0005975
Viun5g03795 839 Gene3D Glycosidases 24 344 - -
Viun5g03795 839 FunFam Beta-galactosidase 749 839 - -
Viun5g03795 839 Gene3D - 755 839 IPR043159 -
Viun5g03795 839 PANTHER BETA-GALACTOSIDASE RELATED 20 742 IPR001944 GO:0004553|GO:0005975
Viun5g03795 839 FunFam Beta-galactosidase 446 583 - -
Viun5g03795 839 Pfam Galactose binding lectin domain 761 838 IPR000922 GO:0030246
Viun5g03795 839 SUPERFAMILY Galactose-binding domain-like 582 744 IPR008979 -
Viun5g03795 839 ProSiteProfiles SUEL-type lectin domain profile. 753 839 IPR000922 GO:0030246
Viun5g03795 839 FunFam Beta-galactosidase 23 343 - -
Viun5g03795 839 SUPERFAMILY (Trans)glycosidases 27 344 IPR017853 -
Viun5g03795 839 Pfam Beta-sandwich domain in beta galactosidase 347 418 IPR041392 -
Viun5g03795 839 CDD Gal_Rha_Lectin_BGal 756 838 - -
Viun5g03795 839 Gene3D - 593 732 - -
Viun5g03795 839 SUPERFAMILY Galactose-binding domain-like 402 573 IPR008979 -
Viun5g03795 839 Pfam Glycosyl hydrolases family 35 35 339 IPR031330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g03795 Viun-Chr5 46605060 46611029 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g03795 13 839 Glycoside Hydrolase AT3G13750 79.373 0.0 1415
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g03795 - - gmx:100811187 1679.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun5g03795 5 46605060 46611029 Viun5g03795 5 46605060 46611029 ECH
Viun5g03795 5 46605060 46611029 Viun10g02535 10 39228883 39235642 PCT