Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g03714 ATGGCGAATCTGGTACCGGGGGTGCTTCTGAAGCTTCTGCAGCACATGAACACCGATGTGAAGGTCGGTGGTGAGCACAGGTCTTCGCTGTTGCAGGTTGTGAGCATTGTTCCGGCGCTTGCAGGGGGCGAACTTTTCCCAAATCAAGGTTTTTACCTCAAAGTCTCTGATTCCTCTCACGCTACTTATGTTTCTCTCCCTGATGAACATGATGATCTCATTCTCAGTGATAAGATTCAGTTGGGTCAGTTTGTGTTTGTTGATCGTGTGGAGGGTGCTTCTCCCGTCCCCATTCTGAGAGGGGTTAGGCCTGTTCCTGGGAGACACCCTTGTGTCGGAACCCCTGAGGATATTGTTGCGACTCATTCCCTTGCGTTCCTCGACAATAATAAGGACAAGAATGGGGTTTCTTCTGGTGTTTCTGACATGGATAGATCGAAGTCTCCGAGGAAAGGTTATAGTGGTGGGGTTGGAGAGAAGGAGAAGAAAGAGAGAGTGAGATCAAATGGTGGTGGTTTGAGTGGTAAAGAGGAAGTACAATCCAGCAAGACTAGGGGCAAATCTCAGCCTCAGCCAGTGAAACCTCCACTCAGGATTGAGGTGAAGAAAGAGTCTTTGACTAGATTGAGGTCTACCAATTCGCGGTCCATTCCTTCGTCACCAAGTAGTTGCTACTCGTTACCAACCTCATTTGAGAAATTTGCCAATGGGGTGAGGCAACACCAGACTAAGGTTGGGGCTAGGGTGGGAGTGGTGGAGACGGGAAAGATGGTTCGTGGGGCTAGTATTTCTGCTGCTGGAAAGAAAATTGCGAATCCGGTTAGAAATTTGGTGCAGGGAATTGAGCTGGGGACTAAGGCTCTGCGGAAGAGCTGGGAAGGGAGTATTGAGGTCAAGACTAGAGAGTCCTCAAAAACCAAGGTTGCAACCAAATTTGATCCTAAGCCTGAACTAAGTACTCCTAGGAGAAGAAGCGTTTCAATCGAAAAAGGACCATCTAAAGAGGAGGAGAGGATCCAAGCATCAACAAAATCAACTAAGGAACAACTTAAGACTCAAACGTCTGCAAAGAAGGCCAGTGGTAATGGAACTACAGCAGAACCAGATAAGTCGAGCAAGTCAAGAACTTCCATTGGAAAGAAAGCAGAAGTTTCTAGCCTCCCTGGAAATTTGGTCAAAGTTTCTCTGAATAATAGAAAAGTGACAGATGCCAATGTTCAATGGGCTTCACTCCCATCATCTATTTCAAAGCTTGGAAGGGAAGTAATGATGCAGAGAGATGCAGCACAGATAGCAGCAACTGAGGCTATGCAAGAGGCTGCTGCTGCAGAGAGTTTACTGCAATGTCTAAGAACATATTCAGAGGTAACTAATTCTGCTAAGGAACATAACCCACAGCCAGCAGTAGAGCAGTTTTTAACCCTTCATGCTAGCTTGAATAGTACCAGGACAATAGCTGAATCCTTAACAAAACACATTCCAGATTGTTCATCTCCAGATTATGACAAGGGTACAGCGGAAGACATACTGAAAGTAAAATCAGACAGACAAAAACAAGCGGCTTCCTGGGTTCAGGCAGCCTTGACCACCAATCTGTCATCCTTTGCTGTTTTTACAAGAGAATCACAAACATCCAAGCCTCCAGCTTCAAGCAGCTCTCAAAACAAAAAGACTGTGGTGGGAAATCAACCCATGTTAGTTCTACACAATTCAAGTGAAGATACTTCGTCAAAAGTTCATGCAAAGACCCGTTTGACAGCAAATTCTAAGCATGCATCACAAGGAACTCCTCGCAAACCAGGTGATGGGTTATTAAATGGGCAGAAGCATCTAGTCCAACCACAACCACTCCCTGAATGGGTTAGAGGGAACGGCCTCAATGAGGTGGTTAATTTGGTGGAAATGTTGCAGTTACAATCCCGGGACTGGTTTTTGAGTTTTGTTGAGAGGTTCTTAGACAGTGATGGGGACACAACCTTGTCAGGTAATGACCAAATAGCAGGTATGCTCACCCAACTAAAAAGTGTTAATGACTGGTTAGATGAAATTGTTTCAAGCAAGGATGAGGGAGAATCATGGCAGATATCAGCAGAGACGATTGACCGGTTGAGGAAGAAAATATATGAATATCTTCTTACTCATGTTGAGTCTGCTGCTGCTGCACTCAGTGGTGGATCACAATCGTCACCTCAGATCCAAACAACAACACAGATTAAAGCCAAAAGGTGA 2229 0.4536 MANLVPGVLLKLLQHMNTDVKVGGEHRSSLLQVVSIVPALAGGELFPNQGFYLKVSDSSHATYVSLPDEHDDLILSDKIQLGQFVFVDRVEGASPVPILRGVRPVPGRHPCVGTPEDIVATHSLAFLDNNKDKNGVSSGVSDMDRSKSPRKGYSGGVGEKEKKERVRSNGGGLSGKEEVQSSKTRGKSQPQPVKPPLRIEVKKESLTRLRSTNSRSIPSSPSSCYSLPTSFEKFANGVRQHQTKVGARVGVVETGKMVRGASISAAGKKIANPVRNLVQGIELGTKALRKSWEGSIEVKTRESSKTKVATKFDPKPELSTPRRRSVSIEKGPSKEEERIQASTKSTKEQLKTQTSAKKASGNGTTAEPDKSSKSRTSIGKKAEVSSLPGNLVKVSLNNRKVTDANVQWASLPSSISKLGREVMMQRDAAQIAATEAMQEAAAAESLLQCLRTYSEVTNSAKEHNPQPAVEQFLTLHASLNSTRTIAESLTKHIPDCSSPDYDKGTAEDILKVKSDRQKQAASWVQAALTTNLSSFAVFTRESQTSKPPASSSSQNKKTVVGNQPMLVLHNSSEDTSSKVHAKTRLTANSKHASQGTPRKPGDGLLNGQKHLVQPQPLPEWVRGNGLNEVVNLVEMLQLQSRDWFLSFVERFLDSDGDTTLSGNDQIAGMLTQLKSVNDWLDEIVSSKDEGESWQISAETIDRLRKKIYEYLLTHVESAAAALSGGSQSSPQIQTTTQIKAKR 742
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g03714 742 Pfam Plant protein of unknown function (DUF936) 4 722 IPR010341 -
Viun5g03714 742 MobiDBLite consensus disorder prediction 130 224 - -
Viun5g03714 742 MobiDBLite consensus disorder prediction 723 742 - -
Viun5g03714 742 MobiDBLite consensus disorder prediction 302 383 - -
Viun5g03714 742 MobiDBLite consensus disorder prediction 210 224 - -
Viun5g03714 742 MobiDBLite consensus disorder prediction 174 189 - -
Viun5g03714 742 PANTHER EXPRESSED PROTEIN 1 723 IPR010341 -
Viun5g03714 742 MobiDBLite consensus disorder prediction 144 171 - -
Viun5g03714 742 MobiDBLite consensus disorder prediction 345 383 - -
Viun5g03714 742 MobiDBLite consensus disorder prediction 302 344 - -
Viun5g03714 742 MobiDBLite consensus disorder prediction 585 610 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g03714 Viun-Chr5 46143413 46147775 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g03714 - - gmx:100814047 1134.01
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun5g03714 5 46143413 46147775 Viun5g03714 5 46143413 46147775 ECH
Viun5g03714 5 46143413 46147775 Viun11g02317 11 37445473 37450655 PCT