Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g03695 ATGGCCTTCAGCAATGGCGTCCCTGCCACCGGCACCGGCCTAATCGCCAGCTTCGGCGAGATGCTCATCGACTTCGTTCCCACCGTCTCCGGCGTCTCCCTGGCGGAGGCTCCTGGCTTCCTAAAGGCACCCGGCGGCGCCCCCGCTAATGTCGCCATCGCCGTCGCGAGACTCGGCGGCAAGGCCGCCTTCGTTGGAAAACTCGGTGACGACGAGTTCGGCCACATGCTCGCCGGAATCCTGAAGGAGAACGGAGTCCGCGCCGACGGGATCACCTTCGACCAGGGCGCCCGCACTGCCCTGGCGTTCGTGACCCTACGCGCCGATGGAGAGCGTGAATTCATGTTCTACAGAAACCCCAGCGCCGACATGCTCCTCCAACCCGAAGAACTCAACCTCGAACTCATCAGATCTGCGAAAGTTTTTCATTACGGATCAATTAGTTTGATCGTGGAGCCATGCAGATCAGCACACTTGAAGGCAATGGAAGTTGCCAAAGAAGCTGGGTGTCTGCTCTCATATGACCCCAACCTCCGTCTTCCCTTGTGGCCCTCGGCCGACGAAGCTCGTAAGCACATACTGAGCATATGGGAGAAGGCTGATTTGATCAAGGTCAGTGATGTGGAGCTTGAGTTCCTCACAAAAAGTGACAAGATTGATGATGCTTCTGCTTTGTCATTGTGGCACCCCAATTTGAAGTTGCTCCTTGTCACCCTAGGAGAACAGGGTTGCAGATACTACACCAAGAATTTCAAAGGATCAGTGGATGCTTTCCATGTCAAGACAATTGATACAACTGGTGCCGGTGATTCCTTTGTTGGTGCTCTGTTGTCCAAGATTGTCGATGATCAGACCATCCTTGAAGATGAATCAAGGTTAAGAGACGTACTCAAGTTTGCTAATGCATGTGGAGCAATTACAACTACCCAAAAGGGAGCAATTCCCGCCCTTCCCAAAGAGGAGGATGCACTGAAACTCATCAAAGGGGCATAG 993 0.5368 MAFSNGVPATGTGLIASFGEMLIDFVPTVSGVSLAEAPGFLKAPGGAPANVAIAVARLGGKAAFVGKLGDDEFGHMLAGILKENGVRADGITFDQGARTALAFVTLRADGEREFMFYRNPSADMLLQPEELNLELIRSAKVFHYGSISLIVEPCRSAHLKAMEVAKEAGCLLSYDPNLRLPLWPSADEARKHILSIWEKADLIKVSDVELEFLTKSDKIDDASALSLWHPNLKLLLVTLGEQGCRYYTKNFKGSVDAFHVKTIDTTGAGDSFVGALLSKIVDDQTILEDESRLRDVLKFANACGAITTTQKGAIPALPKEEDALKLIKGA 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g03695 330 FunFam Probable fructokinase-2 12 330 - -
Viun5g03695 330 Gene3D - 13 330 IPR029056 -
Viun5g03695 330 ProSitePatterns pfkB family of carbohydrate kinases signature 1. 45 69 IPR002173 GO:0016301
Viun5g03695 330 ProSitePatterns pfkB family of carbohydrate kinases signature 2. 264 277 IPR002173 GO:0016301
Viun5g03695 330 PANTHER HEXOKINASE FAMILY MEMBER 14 324 - -
Viun5g03695 330 PRINTS Ribokinase signature 195 210 IPR002139 GO:0016301
Viun5g03695 330 PRINTS Ribokinase signature 235 246 IPR002139 GO:0016301
Viun5g03695 330 PRINTS Ribokinase signature 40 59 IPR002139 GO:0016301
Viun5g03695 330 SUPERFAMILY Ribokinase-like 15 326 IPR029056 -
Viun5g03695 330 CDD bac_FRK 14 314 - -
Viun5g03695 330 Pfam pfkB family carbohydrate kinase 14 319 IPR011611 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g03695 Viun-Chr5 46023521 46026830 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g03695 K00847 - gmx:100803713 615.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun5g03695 5 46023521 46026830 Viun5g03695 5 46023521 46026830 ECH
Viun5g03695 5 46023521 46026830 Viun11g02298 11 37376681 37378646 PCT