Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g03684 ATGGGGGTTATGTCCAGGCGGGTTGTGCCCGTCTGTGGTAACCTCTGTGTGTTTTGTCCTTCTCTGCGTGCAAGATCAAGGCAACCGGTGAAACGTTACAAGAAGTTGATGGCTGAAATATTCCCGCGTAATCAGGTTGCTGAGCCTAACGACAGGAAAATTGGAAAACTATGTGAGTATGCTTCTAGGAATCCATTGAGAATTCCTAAGATTACTGAAAACTTGGAGCAAAGATGTTATAAGGATTTGCGTCATGAAAACTTTGGTTCGGTGAAAGTGGTCTTGTGCATATATGAGAAACTGTTATCGACATGTAAGGAGCAGATGCCGCTGTTTGCCAATAGCTTATTAGGGATCCTTCAAACGCTTCTAGAGCAAACTCGTTCAGAGGAAATGCAGATCTTAGGTTGCAAGACTCTTGTAGAATTTACAAATTGCCAGACAAATGGTACATACATGTTCAACTTAGAGGGTTTTATACCAAAACTATGTCAATTGGCTCAAGAAGCGGGAGATAATGAACAAGCTCTGCTTCTACGATCAGCTGGCCTACAAGCACTATCCTACATGGTGCAGTTCATGGGAGAGCACTCACATCTTTCCACGGATTTTGACCAAATTATATCAGTGATTTTGGAAAATTTCCCGGATCCCCAATCCAAATCCAATCTTGCCGAAGTAGAGAAATTGAATTCACAATCTCAGAGCCATCTGGTCCAACAATTTCCCAAAGGAGGAGACCTACGTTCTTTATCAGCTATCAGTAAGAAGGATGCTTCCTTACTTAATGGTGTGACAGGAACTGAGACAGAACCCAAGTTAGATACTGCTAAAGATCCTGCTTATTGGTCAAAGATTTGCCTGTATAATATGGCCAAATTGGCCAAGGAAGCCACAACTGTGCGCCGTGTCCTTGAACCATTTTTTCATAATTTTGATGCTGAAAACTACTGGTCTTCTGAAAAGGGAGTTGCTTCTTGTATTTTGCAGTATTTGCAATCCCTTCTAGCAGAATCAGGTGATAACTCCCATCTTCTGTTGTCCATTTTGGTCAAGCACTTGGATCATAAAAATGTTGCTAAGCAGCATATCCTTCAGATTGATATCATTAAAACCACCACGCAGCTTGCACAAAATGTGAAGTATCAGGCTTCAGTTGCAATCATTGGTGCAATATCTGATCTCATTAAACATTTTAGGAGATGCCTGCAAAATTTAGCTGAAGCATCCAGCACTGGAGATGGTACATATAGGTTGAATACTGAACTTCAGTCCGTCTTAGAAATGTGTATATTACAACTTTCAAAGAAGGTTGGGGATAAAGGACCAATTCTTGATTTGATGGCTGTGGCATTGGAGAATATCCCAGTTACTACCGTAACAGCAAGATCGACAATCTCTGCTGTCTATCAAATAGCAAAATTAGTCACTTCCGTTCCAAATGTGTCATATCGCAATAAGGCTTTCCCTGATGCCTTGTTTCATCAATTGCTCCTGGTCATGGTTCATCCTGACTACGAAACACAAATTGGAGCACATAGGATCTTCTCTTTGGTGCTTACACCATCCATGGTTTCTCCTTGGTTGGACCACAAAATAATGACTGCTCATACTGGAGATGAAAACTTTAATGGAAAACTTGAAGAAGAAAAGACAATATCTAGTGTCAAATCGAAGAAATATGCAATTCATCCATATAGGGGCTACAGCTTTTCTCCCAAGCTAACTAATGGAAACGACGATAAAAGTTCTCTTAGGCTAAGCAGTCATCAAGTCAGTCTTCTGCTTTCTTCAATCTGGGTTCAGGCAACATCTGTGGGAAATGGCCCTTCAAATTATGAGGCAATGGCACACGCCTATACCATTGCTTTATTATTTACTTGTTCTAAGGCATCCAGTCACACGGGTTTAGCAAGATCTTTTCAACTGGCATTTTCCCTCAGGAGGATCTCTTTGGACCAACAAGGAGGCTTACAACCATCTCGTAGGAGGTCCCTTTTTACCTTGGCTTCATATATGCTTATCTTCTCTGCCAGGGCTGGCAGTCTCCATGATCTAATTCCAATAGTTAAAGCTTCTCTGACCAAAGAAACAGTAGATCCTTTTCTTGAATTGGTTGATGATATCCGACTGCTGGCTGTCCGTAAAGAATCGGAGAATATAATTTATGGATCTCAGGAAGATGAGGCGGCTGCTGTGAAGTCTCTTTCAGCTGTAGAATTGGATGACAAGCAGTTGAAAGAGATTGTAATATCGTACTTTATGACTAAATATTCAAAATTGCCAGAGGATGAACTGTCTAGCATAAAGAATCAACTTGTACAGGGATTTTCCCCCGATGATGCATATCCATTAGGACCTCTGTCATTTATGGAGACATCAAGACCATGTTCTCCTCTTCATATGATTGAATTCCCAAGTTTTGACGAGATAATGATTCCGGATGATTTCACGGAGATAGAGACTGGACATAGTGGCAGCCAGTCAGATCGCAAAACATCACTGTCAACCAACCACCCCGATGTTCTAAATGTTGATCAACTATTAGATTCGGTTTTGGAAACTGCACGGCAGGTTGCAAGTTTCTCCACTTCCTCAACTCCTCTACCTTATGACCAAATGAAGGACCAGTGCGAGGCACTTGAAGCAGGGAAACAACAGAAGATGTCCGTCATTCAGAGTTTCAAGCATCAACAAGAGAGTAACGCCATAGTTCTTTCTAGTGAAAATGAAGTTACAGTTGCCCCTATACATGCTAAGGCACTGGAATATTCAAAAAGTGATTTGAAGTTAGTAACTCAGGAAACATTTAAAGAACAGGATGGAGCACGCGACCATTACGATGACTATGGGCTGCAACATTCTTTGAGGCTACCTCCTTCGAGCCCCTATGATAAATTCTTGAGAGCTGCGGGATGCTAA 2922 0.4151 MGVMSRRVVPVCGNLCVFCPSLRARSRQPVKRYKKLMAEIFPRNQVAEPNDRKIGKLCEYASRNPLRIPKITENLEQRCYKDLRHENFGSVKVVLCIYEKLLSTCKEQMPLFANSLLGILQTLLEQTRSEEMQILGCKTLVEFTNCQTNGTYMFNLEGFIPKLCQLAQEAGDNEQALLLRSAGLQALSYMVQFMGEHSHLSTDFDQIISVILENFPDPQSKSNLAEVEKLNSQSQSHLVQQFPKGGDLRSLSAISKKDASLLNGVTGTETEPKLDTAKDPAYWSKICLYNMAKLAKEATTVRRVLEPFFHNFDAENYWSSEKGVASCILQYLQSLLAESGDNSHLLLSILVKHLDHKNVAKQHILQIDIIKTTTQLAQNVKYQASVAIIGAISDLIKHFRRCLQNLAEASSTGDGTYRLNTELQSVLEMCILQLSKKVGDKGPILDLMAVALENIPVTTVTARSTISAVYQIAKLVTSVPNVSYRNKAFPDALFHQLLLVMVHPDYETQIGAHRIFSLVLTPSMVSPWLDHKIMTAHTGDENFNGKLEEEKTISSVKSKKYAIHPYRGYSFSPKLTNGNDDKSSLRLSSHQVSLLLSSIWVQATSVGNGPSNYEAMAHAYTIALLFTCSKASSHTGLARSFQLAFSLRRISLDQQGGLQPSRRRSLFTLASYMLIFSARAGSLHDLIPIVKASLTKETVDPFLELVDDIRLLAVRKESENIIYGSQEDEAAAVKSLSAVELDDKQLKEIVISYFMTKYSKLPEDELSSIKNQLVQGFSPDDAYPLGPLSFMETSRPCSPLHMIEFPSFDEIMIPDDFTEIETGHSGSQSDRKTSLSTNHPDVLNVDQLLDSVLETARQVASFSTSSTPLPYDQMKDQCEALEAGKQQKMSVIQSFKHQQESNAIVLSSENEVTVAPIHAKALEYSKSDLKLVTQETFKEQDGARDHYDDYGLQHSLRLPPSSPYDKFLRAAGC 973
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g03684 973 MobiDBLite consensus disorder prediction 821 839 - -
Viun5g03684 973 SUPERFAMILY ARM repeat 70 516 IPR016024 -
Viun5g03684 973 MobiDBLite consensus disorder prediction 819 839 - -
Viun5g03684 973 PANTHER PUTATIVE, EXPRESSED-RELATED 1 549 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g03684 Viun-Chr5 45976113 45985545 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g03684 K21842 - gmx:100806860 1522.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun5g03684 5 45976113 45985545 Viun5g03684 5 45976113 45985545 ECH
Viun5g03684 5 45976113 45985545 Viun11g02264 11 37267189 37277772 PCT