Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g03507 ATGGCGGAATCATCTACCAGTTCTGCTGTTTCCGTTGATTCCGTTTCTAGAGACAACAACAGGTTGTGGAAAGGGGCATTTGCTGTCGCTGGAATCATGGTTACCCTCGTCACCTATGGTCTCTTGCAGGAAAAGATCATGAGAGTACCATATGGAGCAGAAAAAGAGTATTTCAAATATTCACTGTTTCTTGTTTTCTGCAACCGCATCACAACATCCGCTGTTTCTGCTGGTTCTTTGCTGGCAAGTAAAAAGGCTATGGACCCGGTAGCTCCTGTTTTTACGTATTGCCTTATCTCGGTATCAAACATACTAACCACAACTTGCCAGTATGAGGCCCTCAAATATGTTAGTTTTCCTGTTCAGACCCTTGCAAAATGTGCAAAAATGATACCAGTTATGGTCTGGGGCACCATCATCATGCAGAAGAGATATCAGGGACCTGACTATTTGCTAGCTTTTTTAATTACCCTTGGCTGCTCAGTATTTATCCTGTATCCGGCAGGAACAGATGTAAGTCCTTACAATAGAGGAAGAGAAAATACAGTTTGGGGTGTTCTCTTAATGGTTGGCTATCTTGGGTTTGATGGCTTTACAAGCACATTCCAAGATAAGCTGTTTAGAGGCTATGACATGGAGATACATAATCAGATATTTTACACAACATTATGTTCTTGTATTCTTAGCCTGACAGGTCTTATTTTACAAGGGCATTTAATACCAGCAGTAGAATTTGTTTATCAGCATCATGATTGTTTCTTAGACATAGCATTGCTTTCAACAGTTGCAACAATTAGTCAATTCTTTATCTCGTACACAATTCGCACTTTCGGTGCTCTGACTTTTGCAACCATAATGACCACAAGACAGTTGGTGAGCATTATGCTGTCATGTGTGTGGTTTTCCCATCCTCTTAGCTGGGAACAGTGGATTGGAGCTGTCATTGTCTTTGGATCCCTTTATGGAAAAAGCTTTACGAGGAAACCACCTCAAAAGACAACCTCGTCATCAGCAGAATTTGTTCCAAACGGGGATTCAAATAATTTGAAGGAGAATCCCTGA 1062 0.4115 MAESSTSSAVSVDSVSRDNNRLWKGAFAVAGIMVTLVTYGLLQEKIMRVPYGAEKEYFKYSLFLVFCNRITTSAVSAGSLLASKKAMDPVAPVFTYCLISVSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMVWGTIIMQKRYQGPDYLLAFLITLGCSVFILYPAGTDVSPYNRGRENTVWGVLLMVGYLGFDGFTSTFQDKLFRGYDMEIHNQIFYTTLCSCILSLTGLILQGHLIPAVEFVYQHHDCFLDIALLSTVATISQFFISYTIRTFGALTFATIMTTRQLVSIMLSCVWFSHPLSWEQWIGAVIVFGSLYGKSFTRKPPQKTTSSSAEFVPNGDSNNLKENP 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g03507 353 PANTHER SOLUTE CARRIER FAMILY 35 MEMBER B 19 327 IPR013657 GO:0055085
Viun5g03507 353 SUPERFAMILY Multidrug resistance efflux transporter EmrE 253 322 - -
Viun5g03507 353 MobiDBLite consensus disorder prediction 327 353 - -
Viun5g03507 353 Pfam UAA transporter family 26 323 IPR013657 GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g03507 Viun-Chr5 44944305 44950455 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g03507 18 343 Organic Solute Cotransporters AT5G59740 80.061 0.0 553
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g03507 K15276 - gmx:100782989 642.114
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun5g03507 5 44944305 44950455 Viun5g03507 5 44944305 44950455 ECH
Viun5g03507 5 44944305 44950455 Viun11g02079 11 36198997 36204228 PCT