Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g03447 ATGCAGCAGACCCCAAAGACAAGAAGTAGCTACTCTGAAGTGCCTCAGAAAGTGTCTCCTCGTGGTGGTGGACGCCAACTCAGGCCTGCTACACTAGACACTGCATCTTCATCAAACCAAGCTCACAAAACTTCAAAGGATAATAGAAGTCCTAAAGTCACCGACCGCAGATCACCCAGAAGTCCAGCTCCAGAGAGGAAGCGTCCTAGCAGAATATCTGAATTAGAATCTCAGATTTCTCAACTGAAAGAGGATTTGAAGGTTGTGAGGAACCAGCTCAGTTTGTCTGATTCATCCAAGAAGCAAGCTCAGCAAGATGCTGAAGAGTCCATGAAACAACTATTTGCCGTATCTGTGAAACTTGAAGATTCTCAACAGCAACTTCAGAAGTTCTCTGCTACTGAACAATCTCGTGTTCTTGAGCTCCAGAAAACTATAGAAGATCATGATAAGGCGTGGCAATCCGAACTCAAAGCTGCACAACAAAAGCTCTCAGACAACACTTCTTCACTGACCTCTGCTATCGATGAAATTCAGCAGCTGAAGGTTCAACTTGAATTGGTAGCTAATTGTGAGAATGCACACACGCAAATTGCAGAATCATCGGACGTGGAGTTACTGAACTTGAAGGATAACTTGGCAGAATCACTTTCCCTTGTGGAGAACATGAAAAACCAACTCAGGGATTCTAAAGAGTCAGGTCAGGCACAAGCTTTGGTCAATGAGACTCTGCGACAACTTGAAGCTGCAAAAAGAACTGTTGAGTTCCTGAGAGCTGATGCTGCAAAAGCTGTGCATGGCTACAACTCTGCTGCTTCGGAATTAGACCAATCTAGAACACGGGTGGAATCACTAGAGACACTAGTCAGTAAACTTGATTTTGGCCCCATTAGTAACAAATGCAACCATTCTTTAAATGTTGCAGATGATGGGAACATGGAGCTGAAACCTGAGATATCACAAAAGGGTGAGGTTCCTAATCACACTGATGCAGAAATTTATTCTCTGAGGTCTGCCATAGAGACTGATGATGAGACTAAGCACCTGGAAGAACATATTCAGTGTTCATTGAAGCTCAGAAAAGCCTATGAATTGATTGAGCAGATAAAATCAGAATCAAGCCAGAGGGAATCCGAGCTAGAGGTAGAACTGAAAAGAAAGAATGCTGATATTGAACATTTGAAGGCTAACCTGTTGGATAAGGAAACTGAGTTGCAGGGCATTGTGGAGGAGAATGAGAAGCTGAATTTGCATCTTCAAAAGAGAAATTCATCCCAAAGAGAACTTGAACTGAAAAAGGAGCTTCGAAAACTAGATGAATGTGTGGCTGAGTTAAAGGGTGATCTAATGGACAAGGAAACAACATTGCAAAGCATATCAGAAGAGAATGAAATGCTGAAGTTTGAGATCAGTAAGAGGTTTGGACATGCTGAAGTTGCTGCAGAACTTGAAGCTGCTAAGGCTGCAGAACGTGAAGCTGTTATGAAACTTGGTATTGTGATGGAAGATGCAGAAAGGAGCAACCGAAAAGCGGAGAGGGTAGCTGAGCAGCTAGAAGCTTCTCAGGCAGCAAATTCAATAGTAGAAGCTGAACTGAGAAGATTGAAGGTACAGTCTGATCAATGGAGGAAAGCTGCAGAAGCAGCTGCTGCTATGCTCTCAGCAGGGAACAATGGGAAGCTGACTGAGAGATCAATGTCTTTAGACAACAACTATAACTCTATGATGAATAAGTACTCACCTTTCTGTGAAGAACTTGATGATGATTTTCAGACCAAGAAAAATGGCAACATGCTGAAGAAGATTGGGATCTTGTGGAGGAAACCTCAAAAATAG 1836 0.4276 MQQTPKTRSSYSEVPQKVSPRGGGRQLRPATLDTASSSNQAHKTSKDNRSPKVTDRRSPRSPAPERKRPSRISELESQISQLKEDLKVVRNQLSLSDSSKKQAQQDAEESMKQLFAVSVKLEDSQQQLQKFSATEQSRVLELQKTIEDHDKAWQSELKAAQQKLSDNTSSLTSAIDEIQQLKVQLELVANCENAHTQIAESSDVELLNLKDNLAESLSLVENMKNQLRDSKESGQAQALVNETLRQLEAAKRTVEFLRADAAKAVHGYNSAASELDQSRTRVESLETLVSKLDFGPISNKCNHSLNVADDGNMELKPEISQKGEVPNHTDAEIYSLRSAIETDDETKHLEEHIQCSLKLRKAYELIEQIKSESSQRESELEVELKRKNADIEHLKANLLDKETELQGIVEENEKLNLHLQKRNSSQRELELKKELRKLDECVAELKGDLMDKETTLQSISEENEMLKFEISKRFGHAEVAAELEAAKAAEREAVMKLGIVMEDAERSNRKAERVAEQLEASQAANSIVEAELRRLKVQSDQWRKAAEAAAAMLSAGNNGKLTERSMSLDNNYNSMMNKYSPFCEELDDDFQTKKNGNMLKKIGILWRKPQK 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g03447 611 Coils Coil 501 538 - -
Viun5g03447 611 Coils Coil 206 226 - -
Viun5g03447 611 Coils Coil 240 260 - -
Viun5g03447 611 MobiDBLite consensus disorder prediction 1 16 - -
Viun5g03447 611 Coils Coil 442 462 - -
Viun5g03447 611 Coils Coil 72 92 - -
Viun5g03447 611 MobiDBLite consensus disorder prediction 1 78 - -
Viun5g03447 611 MobiDBLite consensus disorder prediction 30 44 - -
Viun5g03447 611 Coils Coil 377 411 - -
Viun5g03447 611 PANTHER INTERACTOR OF CONSTITUTIVE ACTIVE ROPS 2, CHLOROPLASTIC-RELATED 3 611 IPR029688 -
Viun5g03447 611 MobiDBLite consensus disorder prediction 45 78 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g03447 Viun-Chr5 44542836 44548992 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g03447 - - gmx:100798050 936.021
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun5g03447 5 44542836 44548992 Viun5g03447 5 44542836 44548992 ECH
Viun5g03447 5 44542836 44548992 Viun11g02008 11 35702323 35708057 PCT