Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g03340 ATGTCAGAGCAAAAGAAACCCCCCAAAAGCAGGGTTTTCTTTGTTGGGATGAAGCTTCTGCACAAACCAGGGAACAAGCCTCTACAAGAGAAAAACAGTTTCTTTCATACATATTACAAATGGGTTCTTTGGCTTTCTCTCTCCCTCTATTTCTTCACGTCCTATCTCATCACCACCAACCCCAACACGGCACCAACCTCTCCAAACACATCGTCCCATGTTTCAAACTCCGAGTCCCACGCTGTCCCCCGTGCCGTTATCGACTCCACAACCAACTCTCTAGGGGTGTTGAAGAATCTGAAGATGTTCGTGTACGAGCTTCCTCCTAAGTTCAACACTGGTTGGCTCGCAAACAAGAGGTGTAGCAATCATTTATTCGCGTCGGAAGTGGCCATCCACAGGGCACTGTTAACGAGCGAGGTTCGCACGTTTGACCCTTACGAAGCTGATTTTTTCTTCGTACCCGTTTACGTCTCTTGCAACTTCAGCGCCGTGAACGGTTTCCCCGCGATTGGGCACGCGCGTTCTATTATCTCCTCCGCCGTCAACCTCGTGTCCACGGAATACCCTTTCTGGAACCGCAGCAAGGGACGCGACCACGTCTTCGTCGCTTCCCACGACTTCGGTGCGTGTTTCCACAGCCTGGAGGATGCGGCCATTGCTAATGGAATACCCCAAATTTTGAAGAACTCCATTGTGTTGCAGACATTCGGCGTTGTTCACAGGCATCCTTGTCAAGACGTGGAGAACGTGGTGATACCGCCTTACGTTTCGCCGGAAAGTGTACGGAGCACGCTGGAGAATTTTCCGGTTAACGGCCCGCGAGAAATTTGGGTGTTTTTCCGTGGGAAAATGGAATTGCATCCTAAAAACATCAGTGGACGGTTTTACAGCAGGCGAGTGAGAACGGAGATTTGGCGGAAGTTCAACGGTGACCGGAGGTTTTACCTGCAGAGGCACAGGTTTAGCGGTTACCAGTTGGAAATTGCTCGGTCGGTGTTCTGTTTGTGTCCGTTAGGGTGGGCTCCGTGGAGTCCGAGGTTAGTTGAATCCGTTGCGTTGGGATGTGTGCCGGTTATTATTGCGGATGGGATTCGGTTACCGTTTTCCTCCACCGTGCGTTGGTCGGAGATATCGCTGACGGTGGCGGAGAGGGACGTGGGGAAGTTGGGGAAGATTCTTGAGCGCGTGGCAGCGACGAACCTGAGTGACATTCAGAGGAACTTGTGGGACCCGCGGACGAGGCAGGCCCTACTTTTCAACGAGGAGATGGAGTATGGCGACGCCACGTGGCAGGTTCTTGTTAGTTTGAGTGAGAAGCTCCATAGGTCTCATCGAAGGTCTTCGGCTAGTGACGAATCAGAGAGTGACACGTGA 1377 0.52 MSEQKKPPKSRVFFVGMKLLHKPGNKPLQEKNSFFHTYYKWVLWLSLSLYFFTSYLITTNPNTAPTSPNTSSHVSNSESHAVPRAVIDSTTNSLGVLKNLKMFVYELPPKFNTGWLANKRCSNHLFASEVAIHRALLTSEVRTFDPYEADFFFVPVYVSCNFSAVNGFPAIGHARSIISSAVNLVSTEYPFWNRSKGRDHVFVASHDFGACFHSLEDAAIANGIPQILKNSIVLQTFGVVHRHPCQDVENVVIPPYVSPESVRSTLENFPVNGPREIWVFFRGKMELHPKNISGRFYSRRVRTEIWRKFNGDRRFYLQRHRFSGYQLEIARSVFCLCPLGWAPWSPRLVESVALGCVPVIIADGIRLPFSSTVRWSEISLTVAERDVGKLGKILERVAATNLSDIQRNLWDPRTRQALLFNEEMEYGDATWQVLVSLSEKLHRSHRRSSASDESESDT 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g03340 458 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 80 416 IPR004263 GO:0006486|GO:0016757
Viun5g03340 458 Pfam Exostosin family 98 396 IPR040911 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g03340 Viun-Chr5 43738755 43741184 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g03340 K20889 - gmx:100807050 764.222
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun5g03340 5 43738755 43741184 Viun5g03340 5 43738755 43741184 ECH
Viun5g03340 5 43738755 43741184 Viun11g01857 11 34505744 34508502 PCT