Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g03249 ATGTCAGAACCACCATTTAGACCACGAGAGAAAATTATTGAGAAGCAAAAGTATTTCCAGAGTGTTCATAAGCACACGTATTTGAAAGGGCCATATGACAAGATTACTTCTGTTGCAATACCACTTGCATTAGCAGCATCTTCATTGTATCTGATTGGAAGAGGGATCTACAACATGTCACATGGAATAGGGAAGAAAGAATGA 204 0.3824 MSEPPFRPREKIIEKQKYFQSVHKHTYLKGPYDKITSVAIPLALAASSLYLIGRGIYNMSHGIGKKE 67
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g03249 67 PANTHER CYTOCHROME C OXIDASE SUBUNIT 7 1 67 IPR039296 -
Viun5g03249 67 Pfam Cytochrome c oxidase subunit VII 10 62 IPR039297 -
Viun5g03249 67 Coils Coil 66 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g03249 Viun-Chr5 43163372 43164835 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g03249 - - gmx:100800807 134.42
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun5g03249 5 43163372 43164835 Viun5g03249 5 43163372 43164835 ECH
Viun5g03249 5 43163372 43164835 Viun11g01774 11 33733525 33735410 PCT