Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g03220 ATGGTGATTCCAATAGCAGTGGCACTGGTGGTGATTCTCAGTGGGTTGGTTTATCAGGCCATAAAACCCCCAGCTCCTAAAACCTGTGGATCCATTGGTGGTCCTCAAGTTACTTCACCCAGAGTGAAGCTCAGTGATGGGAGGCATTTGGCCTACAGAGAATTTGGTGTTCCTAAGGGAGAAGCTAGGTACAAGATCATTGTCATTCATGGATATAACAGTTTCAAAGACACAACTTTACCATTTTCTCAAGAACTTATTGAAGAGCTTGGGATATATTTCCTCCACTTCGACAGGGCTGGTTATGGTGAAAGTGACCCATATTCATCACGTTCTGTGAAGAGTGAAGCTTATGATATTCAAGAACTGGCTGATAAATTGGAGATTGGTGATAAATTCTACATAATTGGAATGTCAATGGGAGGTTACTCTGTTTGGAGCTGCCTAAAATACATTCCACACAGATTATCAGGAGCAGCTTTGGTGGCTCCATTTATAAGCTATTGGTGGCCTTCTTTTCCTGATAATCTTCTGAGAGAGGCATTTCAGATGCTACCTCGGTCAGACCAATGGACTTTTCGAGTTGCACATTACGCCCCTTGGTTGTTCCATTGGTGGATGACACAAAAATGGTTCCCTTCATTAACTTTGACAAATATGTTGTCTCCTGATGATGTAGAAATAGTGAAGACCTTGTCAGAACTCCCAAACACTGCTCAGGAGAGGATAGCTCAGCAAGGTGAATATGAATCTTTACACCGAGACATAATGAGTGCTTTTGGAGAGTGGGAATTTGGCCCCACAGAGATAGAAAATCCTTTCCCTGATAACAATGGTTCAGTCCACATATGGCAAGGCTTTGAAGATAGGATCATTCCCTACACACTGAACCGTTACATCTCTCAGAAATTACCATGGATTCTTTATCATGAGCTTCCTCATGCAGGACATTTGTTTCTCTTCAAGAAAAATGAATGTGAGTCTATTATAAGAGCACTTGTACTCTCACCAGATATTTCAGAATAA 1026 0.4162 MVIPIAVALVVILSGLVYQAIKPPAPKTCGSIGGPQVTSPRVKLSDGRHLAYREFGVPKGEARYKIIVIHGYNSFKDTTLPFSQELIEELGIYFLHFDRAGYGESDPYSSRSVKSEAYDIQELADKLEIGDKFYIIGMSMGGYSVWSCLKYIPHRLSGAALVAPFISYWWPSFPDNLLREAFQMLPRSDQWTFRVAHYAPWLFHWWMTQKWFPSLTLTNMLSPDDVEIVKTLSELPNTAQERIAQQGEYESLHRDIMSAFGEWEFGPTEIENPFPDNNGSVHIWQGFEDRIIPYTLNRYISQKLPWILYHELPHAGHLFLFKKNECESIIRALVLSPDISE 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g03220 341 Pfam Alpha/beta hydrolase family 66 321 IPR000073 -
Viun5g03220 341 FunFam Alpha/beta-Hydrolases superfamily protein 36 334 - -
Viun5g03220 341 PANTHER HYDROLASE, ALPHA/BETA FOLD FAMILY PROTEIN, EXPRESSED-RELATED 6 335 - -
Viun5g03220 341 SUPERFAMILY alpha/beta-Hydrolases 35 323 IPR029058 -
Viun5g03220 341 Gene3D alpha/beta hydrolase 34 334 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g03220 Viun-Chr5 42979427 42982507 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g03220 - - vra:106758725 669.077
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun5g03220 5 42979427 42982507 Viun5g03220 5 42979427 42982507 ECH
Viun5g03220 5 42979427 42982507 Viun11g01741 11 33460265 33462700 ECH
Viun5g03220 5 42979427 42982507 Viun11g01741 11 33460265 33462700 PCT