Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g03185 ATGCCACCCATGGACGCCACTTCTTCTTCTTCTTCCGACATCACCATCCTCCACCCCGACATCATTCAATCCCACATCCTTAATCGCCTCGACGGTCCCACTCTCGCCTCCGCATCCTCCGCCACCCACCACCTCCGCCGTCTCTGCACCGATCACAGCCTCTGGCGGAGCATCTGCGCCGCCACATGGCCCTCTCTCAACCAACCCCACGCGGCTGCCCTCATCGAAACCTTCCCCGCCGCCCACCGCTCTGTCTTTTCCGACTCCTTTCCCTCCATCCAATACTCCCCTCCTCCCCACCCCACCCCAACGCGGTTGCCGCCGGAGTTTGTATCCGCCGTGGACCTTTACTACAAGGGCAGACCCGTCTTTTCGCGCGTCATCACAACCGAAACCCACAAGGGATGGTTCCTCTCCTCCCCGCTCTGGGTGGACCTCCTCGACCCCAACGAGGTGGTCCCCACTCCCTTGATATTCGCGAAGTGCGATGAGGAATCTTCGTGGCTGGCCCACCTGGAGGAGAATCTGGGGATGAGCTGGATCGTCATCGACCCGACCCGGAAGCGCGCGGCGAACGTCTCGAGCCGGCGGCCGGTGGCGGCCCGGCGGCACTGGCTGACGGGGGATCTGGAGGTTTTGTTCGCGGTGACCATGGATACGGTCCAGTGGGTTATCAGGGTCACGTGCTGCGGGAAGGCCGGGGGCGCTGTGCACGTGAGGGAGGCGAGTCTGACGATGGAGGACACGGAGGGGAGACACGTGACCGGCAGGGACAGCTTCGTGATTTTGCAAGACGCCATGGAGAACGGCGCGCGACGAAAACCCGATCCCGAAGAAGCCAAAGCAAGGTTCGATAAATTCTGCCGCTTGAAGAGAGAGATCAGAGAGAGAAAACTACGGAGAGACAGTGCAATGGACATGGTTGCCATGTTGGTCTCTTTCACCATTTTCGTTTCCCTCTTTTGGTTCATGGTCTTTGGTTTTTGA 987 0.6018 MPPMDATSSSSSDITILHPDIIQSHILNRLDGPTLASASSATHHLRRLCTDHSLWRSICAATWPSLNQPHAAALIETFPAAHRSVFSDSFPSIQYSPPPHPTPTRLPPEFVSAVDLYYKGRPVFSRVITTETHKGWFLSSPLWVDLLDPNEVVPTPLIFAKCDEESSWLAHLEENLGMSWIVIDPTRKRAANVSSRRPVAARRHWLTGDLEVLFAVTMDTVQWVIRVTCCGKAGGAVHVREASLTMEDTEGRHVTGRDSFVILQDAMENGARRKPDPEEAKARFDKFCRLKREIRERKLRRDSAMDMVAMLVSFTIFVSLFWFMVFGF 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g03185 328 Gene3D - 5 91 - -
Viun5g03185 328 SUPERFAMILY F-box domain 10 75 IPR036047 GO:0005515
Viun5g03185 328 PANTHER F-BOX PROTEIN-RELATED 5 322 IPR045283 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g03185 Viun-Chr5 42797829 42799234 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g03185 - - gmx:100794825 479.944
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun5g03185 5 42797829 42799234 Viun5g03185 5 42797829 42799234 ECH
Viun5g03185 5 42797829 42799234 Viun11g01698 11 33211877 33214206 PCT