Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g03115 ATGAATTGCGGTGGCGTTGTGGTGAGGTTTGGTTTGTGGGTGGTGGCGCTGTCCATTGCCGGCTACATAGTGGGTCCCCCTCTCTACTGGCACCTCATCGAACTCATCAACCATTCTTCTTCTTCTTGCACTCCCTGCGTCTGTGATTGCTCTTCCCAACCCATCATTTCCATTCCCCAAGGGCTTAGCAACTCTTCGTTTGAAGATTGTGCAAAGCACGATCCAAAGGTGGATGGAGACACCGAAAACAATGTTGCAGAGCTACTGTCAGAAGAACTAAATCTCCGGGAAACTGAAGCTTTGAAAAATCAGCATCGTGCTGACATGGCTCTGCTGGAATCTAAGAAGATTGCATCTCAGTATCAAAAAGAAGCAGACAAGTGTAATTCAGGAATGGAGACATGTGAGGAAGCCAGGGAAAAGTCTGAGATGGCCTTAGTGGCTCAGAAGAAGCTCTCTGCACTATGGGAACTCAGGGCTCGTCATAAAGGATGGAAAGAAGGTCTTGCCAAATCTAATTCTCACTCTAAAGGGAAACTGCAGTCTGCTTAA 552 0.4728 MNCGGVVVRFGLWVVALSIAGYIVGPPLYWHLIELINHSSSSCTPCVCDCSSQPIISIPQGLSNSSFEDCAKHDPKVDGDTENNVAELLSEELNLRETEALKNQHRADMALLESKKIASQYQKEADKCNSGMETCEEAREKSEMALVAQKKLSALWELRARHKGWKEGLAKSNSHSKGKLQSA 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g03115 183 Coils Coil 95 115 - -
Viun5g03115 183 PANTHER EXPRESSED PROTEIN 7 175 - -
Viun5g03115 183 Pfam Protein of unknown function (DUF1068) 7 168 IPR010471 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g03115 Viun-Chr5 42280808 42283065 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g03115 - - var:108332895 356.681
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun5g03115 5 42280808 42283065 Viun11g01625 11 32564015 32566454 PCT