Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g03000 ATGCAATTATTCATCACCTCCTCTGTGGGAGGCCTTGTTTTCTTGGCTTCAATGTGGTTCACAGCTGCACAACCTCTCAACCCTGGGAACTCGCCGTCCTTCAACACCGTCCCCGCATACCCGACCCAAACCCGCTCCCAAATCTGCCGCCTCGACCTCTCCAACGAGCTCTTCGGCGGCGTCAACCACGCCTGCGGCACCACCCTTGACCGCAGCCGCTGCTGTCCAGTCCTTGCCGCCTGGCTCTTCGCCGCCTTCGCCCGAACAGCCCTCGAAGTATCCGCCGCCGCGCCGCCTCCCTCCGGCGACCTCCCCATGATGCCCGACGACTCCCAGAGTTGCGTCAACTCGCTCCAAGACTCACTGAGAAATCGGAGCATCCGAATCCCCCAACCCAACGGCACCTGCGACGCCATTCTCTGCTTCTGCGGCATCAGACTCCACCAGATAACCTCCCTGAGCTGCCCCAACGCGTTCCACATCACTGCGGTTCGAAACGTCTCCGGCACCCACAACGCCACCCCCACCGCCGTTGTACGGAACCTGGAAAAGAATTGCCGCAACGCTTCTTACGCTGGCTGCACGCAATGCCTAAGCGCTCTACAAAAGATAAAAGGGAGTAATAAGGAGAGTGAGAGTGAGAGAGCTAAGAAGATGTTCAACCGTGACTGCCAATTGATGGCGCTGACGTGGCTGCTAGGAAGAAACAAAACGGCGTACATTCCAACCGTTTCGGCGGTGTTGCGAGCTGTGATGTACAGCGCACATCCACACGAATCGAAGTGTAGTCCGGACCAGGACAACATGCCCTTGGCCGTTGATTCCCTGCAATTTGAGACGAACCAGGGTTCATCTAGGCCGTTGAGGATAGTTTGGATTATGCTCCTGATGCTTCTGGTTTTTCCGTGA 909 0.5732 MQLFITSSVGGLVFLASMWFTAAQPLNPGNSPSFNTVPAYPTQTRSQICRLDLSNELFGGVNHACGTTLDRSRCCPVLAAWLFAAFARTALEVSAAAPPPSGDLPMMPDDSQSCVNSLQDSLRNRSIRIPQPNGTCDAILCFCGIRLHQITSLSCPNAFHITAVRNVSGTHNATPTAVVRNLEKNCRNASYAGCTQCLSALQKIKGSNKESESERAKKMFNRDCQLMALTWLLGRNKTAYIPTVSAVLRAVMYSAHPHESKCSPDQDNMPLAVDSLQFETNQGSSRPLRIVWIMLLMLLVFP 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g03000 302 PANTHER GPI-ANCHORED PROTEIN 21 298 IPR040376 -
Viun5g03000 302 Pfam SPARK 46 211 IPR043891 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g03000 Viun-Chr5 41239216 41240869 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g03000 - - var:108334244 583.948
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun5g03000 5 41239216 41240869 Viun5g03000 5 41239216 41240869 ECH
Viun5g03000 5 41239216 41240869 Viun11g01509 11 31250793 31253032 PCT