Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g02789 ATGATTTCCTCCAGCAAACTCAAATCCGTGGATTTTTACAGAAAAATCCCAAGGGATTTAACTGAGGCTTCATTATCAGGAGCAGGGTTATCCATAATAGCAGCTCTCTGCATGGTGTTTTTGTTTGGAATGGAACTTAATAGTTATTTGTCTGTCAGCACCGCTACATCTGTTATTGTTGACAAGAGTAGTGATGGGGACTATTTACGTATAGATTTCAATATGAGTTTTCCTGCCCTTTCTTGTGAGTTTGCAGCGGTTGATGTGAGTGATGTGCTGGGCACAAACAGGCTGAATCTAACAAAAACAGTTCGTAAGTTTTCTATTGATTCAAATTTAAGAACCACTGGTCACGAGTTCCATTCAGAACCAGCTACTATCAACATAAAGCACGATAATGAAGTACATGAAGAATCCATTGGAGGTTCTCTTGAACTCACAACAGATAATTTTGATAAATATGCTCACCAGTTTCCAATTACAGTTATTAATTTTTATGCTCCTTGGTGTTATTGGAGTCAAAGATTGAAACCTTCATGGGAAAAAGCATCTAAAATAATTAGAGAGAGATATGATCCCGAGACGGATGGTCGTATTGTTATGGGGAGGGTAGATTGCACTCAAAATGGAGAATTGTGCCGGAGCCATCATGTACAAGGGTATCCTTCAATTCGTATCTTTCGAAAAGGAAGTGATGTAAGGAGTGACCACGGCCATCATGACCACGAGTCCTATTACGGTGATCGCGACACAGATAGCCTAGTCAAGACTATGGACAATTTAGTGGCGTCTATCCCTTCAGAATCTCAGAAGTTAAGTTTGGGGGATAAATCCAATTTTGCGTCACATAATAAAAGACCAGCACCATCAGCTGGGGGATGTAGAATTGAAGGATATGTGCGTGTTAAGAAGGTTCCTGGAAACTTGGTCATCTCAGCTAGATCCGATGCCCATTCCTTTGATGCTTCTCAAATGAACATGTCACATGTCATAAACCACTTATCTTTTGGAAGGAAAGTGTCACCTAGGGTTATGAGTGATGTGAAGCGCTTGATACCTTACGTAGGTAGCAGCCATGACAGGCTGAATGGCCTATCATTTATCAACACACGTGATTTAGGAGCAAATGTTACTATGGAGCATTACCTTCAGGTGGTTAAAACAGAGGTGATAACAAGAAAAGATTATAAATTAGTTGAGGAGTATGAGTACACAGCGCACAGCAGTGTGGCACAGAGTTTACACATTCCTGTTGCTAAGTTCCATCTTGAGCTCTCCCCCATGCAGGTCTTAATAACAGAAAATCCGAAGTCCTTTTCTCACTTCATTACGAATGTCTGTGCTATTATTGGTGGTGTTTTCACGGTTGCTGGAATTTTGGACTCCATTTTGCACAACACTATTAGACTAATGAAAAAAGTTGAGCTTGGCAAAAATTTTTGA 1443 0.4026 MISSSKLKSVDFYRKIPRDLTEASLSGAGLSIIAALCMVFLFGMELNSYLSVSTATSVIVDKSSDGDYLRIDFNMSFPALSCEFAAVDVSDVLGTNRLNLTKTVRKFSIDSNLRTTGHEFHSEPATINIKHDNEVHEESIGGSLELTTDNFDKYAHQFPITVINFYAPWCYWSQRLKPSWEKASKIIRERYDPETDGRIVMGRVDCTQNGELCRSHHVQGYPSIRIFRKGSDVRSDHGHHDHESYYGDRDTDSLVKTMDNLVASIPSESQKLSLGDKSNFASHNKRPAPSAGGCRIEGYVRVKKVPGNLVISARSDAHSFDASQMNMSHVINHLSFGRKVSPRVMSDVKRLIPYVGSSHDRLNGLSFINTRDLGANVTMEHYLQVVKTEVITRKDYKLVEEYEYTAHSSVAQSLHIPVAKFHLELSPMQVLITENPKSFSHFITNVCAIIGGVFTVAGILDSILHNTIRLMKKVELGKNF 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g02789 480 Gene3D Glutaredoxin 128 285 - -
Viun5g02789 480 ProSiteProfiles Thioredoxin domain profile. 111 263 IPR013766 -
Viun5g02789 480 FunFam Protein disulfide-isomerase 5-4 131 287 - -
Viun5g02789 480 PANTHER ENDOPLASMIC RETICULUM-GOLGI INTERMEDIATE COMPARTMENT PROTEIN 5 479 IPR045888 -
Viun5g02789 480 Pfam Thioredoxin 144 242 IPR013766 -
Viun5g02789 480 SUPERFAMILY Thioredoxin-like 144 261 IPR036249 -
Viun5g02789 480 Pfam Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) 7 97 IPR039542 -
Viun5g02789 480 MobiDBLite consensus disorder prediction 273 293 - -
Viun5g02789 480 CDD PDI_a_family 144 258 - -
Viun5g02789 480 Pfam Endoplasmic reticulum vesicle transporter 288 461 IPR012936 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g02789 Viun-Chr5 39458220 39466828 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g02789 - - gmx:100806869 876.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun5g02789 5 39458220 39466828 Viun5g02789 5 39458220 39466828 ECH