Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g02773 ATGGAGTCAATACTGGGTCGGGCTCTCGAGTACACTCTCAAGTACTGGCTCAAATCCTTCTCCCGAGACCAGTTCAAGTTGCAGGGACGCACCGTTCACCTCTCCAATTTAGATATCGACGGCGACGCCTTGCATTCCAGTGTCGGATTGCCGCCGGCGCTCAACGTTGCCACTGCCAAAGTCGGCAAACTAGAGATAACACTTCCGTCTGTGAGCAATGTACAGACGGAGCCAATCGTCGTGCATATTGATAGACTCGATCTGGTTCTCGAGGAGAATTCTGATTTTGATGCATCGCTTAGTTCGAACTGTTCCACGCTGTCGGCTGCCTCTTCCAAGGGAAGTGGTTATGGTTTCGCTGATAAGATTGCAGATGGCATGACTATACAAATTCAAACAGTTAATCTATTGCTTGAAACTTGTGGTGGTTCTCGTCGCCAAGGCCAAGGGGGAGCAACATGGGCACCACCTATGGCATCTATCACCATACGCAACCTTTTGTTGTATACTACAAATGAAAACTGGCAGGTTGTAAATCTTAAGGAAGCGCGGGAATTCTCCACTAACAAGAAGTACATATATGTCTTCAAAAAACTGGAATGGCAATCTTTGTCTATTGATCTTTTACCTCATCCCGACATGTTCACAGAAGCTACTCTAGACCTCTCTGAGGAGGGGTCAAACCTTAGGGATGATGATGGTGCAAAGCGTGTATTCTTTGGAGGAGAGCGTTTTATAGAAGGAATATCAGGAGAAGCATATATCACAATTCAGAGAACTGAGTTGAATAGCCCACTTGGGCTTGAAGTTCAATTGCACATCAACGAAGCTGTTTGCCCTGCATTAAGCGAACCAGGACTACGTGCACTTCTCAGATTTATGACTGGGGTTTATGTTTGTCTAAACAGGGGTGATGTTGATTCCAAGCGATCCACTGAAGCAGCTGGGCGTTCTCTTGTCTCGATTGTCGTAGATCATATATTTCTTTGTATTAAAGATACTGAATTCCAGCTTGAGCTTTTGATGCAGTCTCTCTTTTTTTCTCGGGCCAGTCTTTCTGAAGGAGATAATGATAATAACTTGACAAGAATTACAATTGGTGGCTTATTTTTAAGGGACACCTTTTGTAGTCCTCCATGTATCTTAGTGCAACCATCAATGCAAGCTGGCACTAGAGATGCTTTCCGTGTGCCAGAATTTGCCAGAAGCTTTTGCCCTCCAATATATCCTTTACAAGAACAGCAGTGGCAATTGAATGAGGGAACCCCTCTAATTTGCCTCCATGCTCTTAAGATCATGCCCTCTCCACTTCCACCATCCTTTGCTTCTGAAACTGTTATTGACTGCCAGCCACTTGTGATTCATCTCCAGGAAGAATCATGTCTGAGGATATCCTCTTTATTAGCTGACGGTATTGTTGTCAATCCTGGTGATATTTTACCCGATTTCTCGGTGAAGTCTTTTATTTTCAATCTCAAGGGACTGGATATTACAGTTCCTTTTGACGAGACCAAATTGGATATTTCCAAAAATGACATGGACAATACAGTTCAGACCTCCTTTTCTGGAGCAAAACTTCATATTGAAAGCCTTTTCTTTGTAAATTCACCCTCACTGAAATTGAAAATGCTGAACCTGGAGAAGGATCCTGCTTGCTTTAGTCTTTGGGAAGGTCAACCAATTGATGCTAGCCAGGAGAAATGGACTGCTAGAGCATCCCAGCTTACTTTGTCTCTGGAAGCATGCATTGATGGACCTGGATGTCAAAATTCTCTTGGACAGACGGCAGGATTGTGGAGATGTGTTGATCTGAAAGATGCTTGCATAGAAGTGGCTATGGCAACTGCTGATGGCAGTCCCTTGTTACAAGTTCCCCCGCCTGGAGGTATTGTCAGGGTTGGAGTTGCTTGTGAACAGTATCTGTCCAACACTTCTGTTGAACAATTGTTTTTTGTCCTGGATCTATATGGTTATTTTGGGAGAGTTAGTGAAAAGATAGCAATGGCTGGAAAAAGAAAACAATTGGAGGACATTAGGGACAAATCCTTTGGTGGAAAGCTGATGGACAAGGTTCCTAGTGATGCTGCTGTCAGTTTATCAGTGAAAAATCTTCAACTTCGATTTCTGGAGTCATCTTCTGTTAATATTGAGGGGATGCCTTTAGTGCAGTTTCTTGGAGATGATCTATTTACTAGTGCCACTCATAGAACCCTTGGAGGTGCTATTATTGTTTCAACTATTCTACGTTGGGAGACTGTTGAGATAAGTTGTGTAGATGCTGAGGGGCTCTTGCCGTGTGAAAAGGCCTCATTCTTGTGTTCTAAGGAAAATGCTCCCTCACTGAGCGATAATGGATATCCTCAGCTAAGAACTGTTTTTTGGGTGCATAAGAATGAGAAGCATCTATTGAATGGAAACGCTCATTCAGTCCCTTTTCTAGATATAACCATGGAGCATGTAATACCATTATATGAACAAGACTTGGAATCTCATAGTTTAAATGTCTCAGCCTCTGTATCTGGTGTTCGTCTTGGTGGTGGAATGAACTATGCTGAAGCCCTCCTGCATAGGTTTGGAATACTTGGGCCTGATGGAGCTCCCGGAATGGGTCTTTGTAAAGGATTGGAAAACTTACAAAAAGGACCGTTGTCAAAACTTTTTAAGGCAACTCCCCTCATTGTTGATGATTCAGAAGATGTTGGAAGTATGATAGAAGGGAAAGAAGCCGCTTTTCCCCAATTGAAGAAGCCTGATGATGTGGATGTAACTATAGAATTGAGAGACTGGTTATTTGCCCTTGAAGATACACAAGAGACAGCTGAAAGATGGTGGTTCTCCAGCCATGAAGATGAAGACAGAGAAGAGAGGAGTTGGCATGCATCTTTCCATGGTTTACGAGTAAATGCAAAAAGTAGCCCACCAAATGTTCCAGATGGAAAAATACAAGTGCAAAGAATAAAACAACATCCAGTAGAATTGATTACGGTTGGAGTTCAAGGTCTGCAAATCTTGAAGCCTCATTTACAAAAGGGCATTCCTTCATCAATGCTAATTGCAAATGGGGGTAAAGAATCTACGGACGCAGTTGGAGGAATTGGTGTTGAAGTTCGCTTGATTTTAGGTGCGGAGAATGTTGATGATGAACTGGCTAATTGGGAAGTGGAAAACCTAAAGTTCTCTGTCAAACAACCGATTGAGGCAGTTGTAACCAAGGATGAGGTTCAGCACCTTACTTTTCTGTGCAAATCTGAAATTGACTCAATTGGCCGGATAACTGCTGGAATTATTCGGTTGCTGAAGTTAGAAGGTTCTATTGGCCAGTCAGTAATTGATCAACTTGGGCACCTAGGAAGTGAAGGCATTGATAAGATTTTCTCTCCGGAAAAGGTTAGCAGAGACGGAAGTGTTGGCAGTAGAGGAATTTCTCCACTGCCAATTCTCATAAATGAGGAATCTCACAGAACTTCGGAACAAACATTAACTTTGCTCGAGGAAGCACTTGTGGACTCACAGGCTAAACTTAATGATTTAATCAGTGATATTAGTACTTCAGACTCTTCTTCTCAACACCTTACCATTCTCCAACTGGGTCAAAAGATAGAGACTATGCATGACTTATTGATGCAATTACGGCACCAACTTTAA 3645 0.4272 MESILGRALEYTLKYWLKSFSRDQFKLQGRTVHLSNLDIDGDALHSSVGLPPALNVATAKVGKLEITLPSVSNVQTEPIVVHIDRLDLVLEENSDFDASLSSNCSTLSAASSKGSGYGFADKIADGMTIQIQTVNLLLETCGGSRRQGQGGATWAPPMASITIRNLLLYTTNENWQVVNLKEAREFSTNKKYIYVFKKLEWQSLSIDLLPHPDMFTEATLDLSEEGSNLRDDDGAKRVFFGGERFIEGISGEAYITIQRTELNSPLGLEVQLHINEAVCPALSEPGLRALLRFMTGVYVCLNRGDVDSKRSTEAAGRSLVSIVVDHIFLCIKDTEFQLELLMQSLFFSRASLSEGDNDNNLTRITIGGLFLRDTFCSPPCILVQPSMQAGTRDAFRVPEFARSFCPPIYPLQEQQWQLNEGTPLICLHALKIMPSPLPPSFASETVIDCQPLVIHLQEESCLRISSLLADGIVVNPGDILPDFSVKSFIFNLKGLDITVPFDETKLDISKNDMDNTVQTSFSGAKLHIESLFFVNSPSLKLKMLNLEKDPACFSLWEGQPIDASQEKWTARASQLTLSLEACIDGPGCQNSLGQTAGLWRCVDLKDACIEVAMATADGSPLLQVPPPGGIVRVGVACEQYLSNTSVEQLFFVLDLYGYFGRVSEKIAMAGKRKQLEDIRDKSFGGKLMDKVPSDAAVSLSVKNLQLRFLESSSVNIEGMPLVQFLGDDLFTSATHRTLGGAIIVSTILRWETVEISCVDAEGLLPCEKASFLCSKENAPSLSDNGYPQLRTVFWVHKNEKHLLNGNAHSVPFLDITMEHVIPLYEQDLESHSLNVSASVSGVRLGGGMNYAEALLHRFGILGPDGAPGMGLCKGLENLQKGPLSKLFKATPLIVDDSEDVGSMIEGKEAAFPQLKKPDDVDVTIELRDWLFALEDTQETAERWWFSSHEDEDREERSWHASFHGLRVNAKSSPPNVPDGKIQVQRIKQHPVELITVGVQGLQILKPHLQKGIPSSMLIANGGKESTDAVGGIGVEVRLILGAENVDDELANWEVENLKFSVKQPIEAVVTKDEVQHLTFLCKSEIDSIGRITAGIIRLLKLEGSIGQSVIDQLGHLGSEGIDKIFSPEKVSRDGSVGSRGISPLPILINEESHRTSEQTLTLLEEALVDSQAKLNDLISDISTSDSSSQHLTILQLGQKIETMHDLLMQLRHQL 1214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g02773 1214 PANTHER UNCHARACTERIZED 1 1212 IPR026728 -
Viun5g02773 1214 Pfam N-terminal region of Chorein or VPS13 1 98 IPR026854 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g02773 Viun-Chr5 39251607 39260980 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g02773 - - gmx:100811661 2159.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun5g02773 5 39251607 39260980 Viun5g02773 5 39251607 39260980 ECH