Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g02768 ATGGAGGACACAGAAAAGCTCAAAAAGTCCAAGGTTATCAGAATAGACTCTCAAAAATCATGGGAACACTACATCTCTCATGTCACCGATCAAAAATACCCTGTTGTGGTTCATTTCTCTGCTTTCTGGTGTGTGCCTTCTATAGTAATGAATCCTGTTTTTGAAGAACTGGCCTCCAATTACCAAGATGTTCTGTTTCTGACATTGGATGTGGATGAAGTTAAGGAAATTGCCTCCAAGATGGAGATCAAAGCCATGCCCACTTTTGTGTTGCTGAATGGAGGAACTCCTGTGGGGAAAATTGTTGGTGCAAATCCCGATGAAATAAGGAAAAGGATTGATGATTTTGTTCAGTCAAGTCTCTCCTACAAATCTGAGTGA 381 0.4068 MEDTEKLKKSKVIRIDSQKSWEHYISHVTDQKYPVVVHFSAFWCVPSIVMNPVFEELASNYQDVLFLTLDVDEVKEIASKMEIKAMPTFVLLNGGTPVGKIVGANPDEIRKRIDDFVQSSLSYKSE 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g02768 126 CDD TRX_family 22 114 - -
Viun5g02768 126 ProSiteProfiles Thioredoxin domain profile. 1 118 IPR013766 -
Viun5g02768 126 PANTHER THIOREDOXIN 12 114 - -
Viun5g02768 126 FunFam Thioredoxin 9 118 - -
Viun5g02768 126 Gene3D Glutaredoxin 1 123 - -
Viun5g02768 126 SUPERFAMILY Thioredoxin-like 8 118 IPR036249 -
Viun5g02768 126 Pfam Thioredoxin 22 114 IPR013766 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g02768 Viun-Chr5 39201941 39203854 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g02768 K03671 - gmx:100813627 215.698
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun5g02768 5 39201941 39203854 Viun5g02768 5 39201941 39203854 ECH