Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g02760 ATGGAGGTGAAGAAGAAGAAGCAGAAGAAAAGTGGAGAAGAAGCAAGAAGATTCTGTGTTACTGGAGCAACTGGGTATATTGGTTCATGGCTTGTGGAGACTCTTCTTCAAAGAGGTTACACTGTTCATGCCACTGTTAGAGATCCTGAAAAGTCACTTCACCTGTTATCGTTATGGACAAGAGGTGACCGATTGAGGATTTTCAAGGCGGATTTGAATGAAGAAGGGAGTTTCGATGAGGCTGTAAGAGGCTGTGATGGGGTTTTTCATGTTGCAGCTTCAATGGAGTTCAATGTGGATCACAAAGAAAACATTGAGGCCTATGTTCAAGCAAACATAATCGATCCTTCAATCAAAGGGACCTTAAACCTTCTGAAGTCCTGCATGAATTCCAGTTCTGTGAAAAGGGTTGTTCTCACTTCTTCAATAAGTACAATTACTGCCAAAGACAGCAATGGGAAGTGGAAACCTGTTGTTGATGAATCTTGCCAGATCCAAACAGAACATGTGTTAAAAATACAAGCAAGTGGATGGGTTTATGCACTTTCAAAGCTTCTAACAGAAGAGGCAGCATTTAAGTTTGCAAAAGAGAATGGCATTGATCTTGTGTCAGTCATAACAACCACTGTTGCAGGTGAAGGTGAGTTCTTGAAGATATTATCTGCTGTGAATGCAAGAATGGGGTCAATTGGTTTAGTTCACATTGAGGATATATGCAGTGCGCATATTTTCCTAATGGAACATCGTAAAGCAGAAGGTCGATACATATGCAGCAGCCAAAGCTGTCGATTGTCTATGTTGGCTAATCTTCTTACAACAGAGTATTCTTACTCAAATAAGAAAAGGATAGGTGAGAAAAATTATGATAAAGTTCCTTCTGAGATTTGCTCAAAGAAATTAAGAGATCTGGGTTTTAGTTACAAGCATGGAGTTGAAGATATAATCCACCACACAATTATTTGTTGCCTAGATTATGGCTATTTACCTCCCATTAGACAATAG 1002 0.3942 MEVKKKKQKKSGEEARRFCVTGATGYIGSWLVETLLQRGYTVHATVRDPEKSLHLLSLWTRGDRLRIFKADLNEEGSFDEAVRGCDGVFHVAASMEFNVDHKENIEAYVQANIIDPSIKGTLNLLKSCMNSSSVKRVVLTSSISTITAKDSNGKWKPVVDESCQIQTEHVLKIQASGWVYALSKLLTEEAAFKFAKENGIDLVSVITTTVAGEGEFLKILSAVNARMGSIGLVHIEDICSAHIFLMEHRKAEGRYICSSQSCRLSMLANLLTTEYSYSNKKRIGEKNYDKVPSEICSKKLRDLGFSYKHGVEDIIHHTIICCLDYGYLPPIRQ 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g02760 333 Pfam NAD dependent epimerase/dehydratase family 19 248 IPR001509 -
Viun5g02760 333 CDD FR_SDR_e 19 305 - -
Viun5g02760 333 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 16 327 IPR036291 -
Viun5g02760 333 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 17 316 - -
Viun5g02760 333 Gene3D - 12 333 - -
Viun5g02760 333 FunFam Dihydroflavonol reductase 15 330 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g02760 Viun-Chr5 39148350 39151735 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g02760 12 319 Miscellaneous Gene Families AT4G27250 55.046 3.63e-122 353
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g02760 - - ccaj:109815084 554.288
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun5g02760 5 39148350 39151735 Viun5g02760 5 39148350 39151735 ECH