Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g02750 ATGGCCGCCACTCTGCCCTCTGACTACGAAAACCTCCGCTCGCCGTTGCTGCAGGCGGAGGTCAAGAAACCGGCGGTGGAGAAGCTCTGCATCGATGACATGCTGCAGAAGTACTGTGGTGAGTTCGGGCGGTGGCAGCTCCAACACTTCATCCTCACCAGCCTTGCCTGGGCGCTCGAGGCCTTCCACACCATGATAATGATCTTCGCCGACCGCGAACCAGACTGGAGGTGCGTCTCCGGCACCAATTGCAACAGTGGGGCAGCTGGCGGCGTATGTGGCCTTGCGCCAGATGCGTGGGAGTGGGTTGGTGGCCGCCACGACTCCACCGTGTCGGAATGGGGTCTGATTTGCGACGATAAGTTCAAGGTTGGATTGGTTCAGGCCGTGTTCTTCACTGGATGCATGATTGGTGCTGGAATATTTGGCCACCTCTCAGACTCTTCCCTGGGAAGAAAAGGCTCTCTAACAGTGGTTTGCGCCCTTAACACTCTCTTTGGCTGCTTAACAGCACTGTCCCCTAACTACTGGATCTATGCACTCCTCCGCCTCCTCACCGGCTTCAGCAGCGGCGGCGTTGGCCTCACTGCCTTCGTCCTCGCCACCGAACCAATCGGCCCGACGAAGCGCGGTATGGCGGGCATGTCCACCTTCTACCTCTTCTCCGGCGGCATTGCAGTTCTCTCTGGAATCGCTTACATCTTCCAATCATGGCGCTATCTCTACATAGCTTCCTCCATCCCCTCCTTCCTCTACATCATCCTTGTCCTACCCTTTATTTCTGAGTCCCCAAGATGGTACCTTGTTCGCGGGAAAGTAACCGAAGCCATGAAGCTCATGTCCGCCATTGCTTCTTCCAACGGGAAGCACCTTCCCGATGGTGTTTTCCTTGCTCTCGACGATGAAGCACCGTCCAAAAAAACCCAAGATTCAGGTCATGATATAACCCTGATGGCATACAAAAATGAAAACTTGGAAAACAAAGGCGCGCTGGTGGGATCCATCGTAGACGTAATTCGTTCTCCCATCACTCGTGTGCGGTTGTTCTTAGCGGTGGCTCTTAACTTCTTAACCTCCGTTGTCTACTACGGACTTAGTTTAAATGTTGTGAACCTCGAAACCAACCTTTACCTGAACGTGATGTTGAACTCCGTGGCTGAGATGCCGGCGTTTACCATAACGGCGGTGCTTTTGGACAGGTTTGGACGAAAGCCATTGACGGTGGCGACAATGTGGTTCAGCGGGTTGTTTTGTTTGATAGGGAGTTTGGTTGGCAACGTCGGAGCGTGGAAGGTGGTGAGAATGGTGTGTGGTATTGTGGGGATATTTGGGATGGCCGGGACTTATAATTTATTGTTTATTTACACGGCGGAGCTGTTTCCGACTGTGGTGAGGAACGCAGCCCTTGGATGCACCACGCAGGCAGCGCAAATGGGAGCAATACTGGCGCCGTTTGTGGTGGTTTTGGGCGGCGGGCTGCCGTTTGCGGCGTTTGCAGCATGTGGAATATTGGGAGGAATGTTTGCGTTTTATCTTCCAGAGACGATGAATCAACCTCTTTATGATACATTCACCGCAATGGAAGGAGGACTTGCTTGA 1599 0.5341 MAATLPSDYENLRSPLLQAEVKKPAVEKLCIDDMLQKYCGEFGRWQLQHFILTSLAWALEAFHTMIMIFADREPDWRCVSGTNCNSGAAGGVCGLAPDAWEWVGGRHDSTVSEWGLICDDKFKVGLVQAVFFTGCMIGAGIFGHLSDSSLGRKGSLTVVCALNTLFGCLTALSPNYWIYALLRLLTGFSSGGVGLTAFVLATEPIGPTKRGMAGMSTFYLFSGGIAVLSGIAYIFQSWRYLYIASSIPSFLYIILVLPFISESPRWYLVRGKVTEAMKLMSAIASSNGKHLPDGVFLALDDEAPSKKTQDSGHDITLMAYKNENLENKGALVGSIVDVIRSPITRVRLFLAVALNFLTSVVYYGLSLNVVNLETNLYLNVMLNSVAEMPAFTITAVLLDRFGRKPLTVATMWFSGLFCLIGSLVGNVGAWKVVRMVCGIVGIFGMAGTYNLLFIYTAELFPTVVRNAALGCTTQAAQMGAILAPFVVVLGGGLPFAAFAACGILGGMFAFYLPETMNQPLYDTFTAMEGGLA 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g02750 532 ProSiteProfiles Major facilitator superfamily (MFS) profile. 49 517 IPR020846 GO:0022857
Viun5g02750 532 Pfam Sugar (and other) transporter 120 521 IPR005828 GO:0016020|GO:0022857|GO:0055085
Viun5g02750 532 ProSitePatterns Sugar transport proteins signature 1. 394 410 IPR005829 GO:0016020|GO:0022857|GO:0055085
Viun5g02750 532 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 42 522 - -
Viun5g02750 532 ProSitePatterns Sugar transport proteins signature 2. 185 210 IPR005829 GO:0016020|GO:0022857|GO:0055085
Viun5g02750 532 SUPERFAMILY MFS general substrate transporter 120 520 IPR036259 -
Viun5g02750 532 Gene3D MFS general substrate transporter like domains 50 524 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g02750 Viun-Chr5 39018793 39022889 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g02750 6 528 Organic Solute Cotransporters AT3G20660 67.424 0.0 713
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g02750 K08202 - gmx:100797665 895.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun5g02750 5 39018793 39022889 Viun5g02750 5 39018793 39022889 ECH