Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g02742 ATGCCTGAGGCTCCCAGAGACTCCCACATAGAGCATGACCTTGCAGAGAAGAACAGGGAGATTCTGAACTTCATAGAGGATGTCACTGCTAACGCAGATGAAGTTCAGAAGAGGGTTCTTTCTGAAATTCTGTCCCGCAATGCAAACGTTGAGTACCTGCGACGACACGGTTTGAATGGCCAAACCGACCGCGACACCTTCAAGAACCTTCTCCCTGTCATTACCTACGAGGATGTCCAACCTGACATTAACCGCATCGCCAATGGTGACACCTCCCCAATTCTCACCTCCAAACCCATCACAGAGTTTCTCACCAGCTCTGGAACATCAGGGGGTGAGAGAAAGTTGATGCCAACAATCGAGGAGGAGTTAGGGAGGAGGTGTATGTTGTACAGTCTGTTGATGCCAATAATGAGCCAGTTTGTTCCAGACCTAGAAAAGGGAAAAGGAATGTATTTGATGTTCATAAAATGCGAGTCCAAAACACCTGGAGGAATAGTGGCTCGTCCAGTTCTCACAAGCTACTACAAGAGCCCCTACTTTAGGGACAGACCCTACGACCCTTACACGAACTACACAAGCCCAAATGAGACCGTCCTCTGTCCCGATTCCTACCAAAGCATGTACTCCCAACTCCTTTGTGGCCTTTGCCAAAACAAAGAGGTTCTGAGAGTGGGGGCCATCTTTGCCTCTGGCTTCATTCGTGCCATTCGCTTCCTGGAGAAACACTGGACCCTCCTTTGCAACGATATCAGAACAGGAACTGTCAACCCTCTGATCAGTGACACGTCAGTGAGAGAGGCTGTGATGAGGATCCTGAAGCCTGATTCCAAGCTTGCGGATATGATTCACAGGGAGTGTAGCAAGGGGTGCTGGCAGGGGATTATTACCAGGCTTTGGCCCAATACAAAGTATGTGGATGTTATTGTGACGGGGACTATGGCACAATACATTCCCACTTTGGATTACTACAGCAATGGCCTCCCACTTGTTTGCACCATGTACGCTTCTAGTGAGTGTTACTTTGGGGTCAACCTCAACCCTCTTTGCAAACCTACCCAAGTCTCTTACACCCTCATCCCCACCATGTGTTACTATGAATTCCTACCCGTCAACCGAACCCTTTCTAGACCATCACCAACATCTCTCAATCACACACAATTGCTCGAGCTCGCTGATGTCAAACTTGGTCAAGAATACGAGCTCGTCGTCACAACTCATGCTGGGCTTTATCGGTATAGAGTGGGAGATATACTGAGGGTGACAGGGTTCAAGAACAAGGCCCCACAGTTTAGCTTTGTGTGCAGAAAGAACGTTGCCCTGAGCATAGATTCCGACAAGACCGATGAGGTTGAGCTGCAAAACGCAATGAAGAATGCAGTGACACACCTGGTTCCATTTGATGCTCACGTGAGTGAGTACACCAGCTACGCAGACACCACCACAATCCCGGGACACTATGTGTTGTATTGGGAGCTAAGCCTGAACGGGTCAACCCCTATTCCACCCTCCGTCTATGAAGATTGTTGCCTTACAATTGAGGAGTCGCTGAACAGCGTGTATCGCCAGGGTCGTGTCTCGGACAAATCAATAGGACCCCTTGAGATCAAGATTGTGGAACAGGGTACCTTTGACAAACTCATGGACTATGCCATTAGCTTAGGTGCGTCAATTAACCAGTACAAGGCACCAAGGTGTGTCAAGTTTGCTCCTATGGTGGAATTGTTGAACTCAAGGGTAACATCCAACTATTTTAGCCCCAAGTGTCCTAAGTGGGTTCCGGGACACAAACAGTGGATTCATTGTAATTGA 1812 0.4851 MPEAPRDSHIEHDLAEKNREILNFIEDVTANADEVQKRVLSEILSRNANVEYLRRHGLNGQTDRDTFKNLLPVITYEDVQPDINRIANGDTSPILTSKPITEFLTSSGTSGGERKLMPTIEEELGRRCMLYSLLMPIMSQFVPDLEKGKGMYLMFIKCESKTPGGIVARPVLTSYYKSPYFRDRPYDPYTNYTSPNETVLCPDSYQSMYSQLLCGLCQNKEVLRVGAIFASGFIRAIRFLEKHWTLLCNDIRTGTVNPLISDTSVREAVMRILKPDSKLADMIHRECSKGCWQGIITRLWPNTKYVDVIVTGTMAQYIPTLDYYSNGLPLVCTMYASSECYFGVNLNPLCKPTQVSYTLIPTMCYYEFLPVNRTLSRPSPTSLNHTQLLELADVKLGQEYELVVTTHAGLYRYRVGDILRVTGFKNKAPQFSFVCRKNVALSIDSDKTDEVELQNAMKNAVTHLVPFDAHVSEYTSYADTTTIPGHYVLYWELSLNGSTPIPPSVYEDCCLTIEESLNSVYRQGRVSDKSIGPLEIKIVEQGTFDKLMDYAISLGASINQYKAPRCVKFAPMVELLNSRVTSNYFSPKCPKWVPGHKQWIHCN 603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g02742 603 PANTHER GH3 DOMAIN-CONTAINING PROTEIN 18 589 IPR004993 -
Viun5g02742 603 Pfam GH3 auxin-responsive promoter 25 568 IPR004993 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g02742 Viun-Chr5 38939567 38942051 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g02742 13 586 EF-hand Containing Proteins AT1G23160 50.086 0.0 585
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g02742 K14487 - gmx:100797120 1121.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun5g02742 5 38939567 38942051 Viun5g02742 5 38939567 38942051 ECH