Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g02681 ATGGCCTCTGTCCATAGCACCGTCGCTCCCCGCGCCTTCTTGCCGTCGATTTCCAAGCCCAAGCTGAAGGCTCCTCACACCAAATCCTTCGCCGGTGCCGGCGCGCACGATTTTCCTAGATTTTCTCGGAGCCGCATTTTCTCGGGAAACAATCGCGCGGTGGCGGCAAGCGCGGCGGGGGAGGAGTTCGACGTGATATCGGTGCAGAGCAACGATATTACGGACCAGCAGGAGGGAGTGTTGGTGAGTCGCGTCGAGATTGATGGCGCTGACGGCGAATTGGTGACTCAGGTGAACGGATTCGGAGCCAATGATGGTTTGTTGTCGTTGGAAGGATTTTCTTCTTCCTCTGCGCCCTCTTCTTCGGCCTTGGTTGGGAGTGAGAGCGAGGAGGACGAGGAGAAGCTGATTGATAGAACCATCAACGCTACGATTGTGCTTGCCGCTGGTACTTTCGCCGTCACCAAGCTTCTCACCATTGATAGTGATTACTGGCATGGATGGACGCTCTATGAGATACTAAGATATGCACCTCAGCACAACTGGTCTGCTTATGAGGAAGCTCTTAAGACAAATCCTGTTCTTGCCAAGATGATGATTAGTGGGATTGTTTACTCTGTTGGGGACTGGATTGCACAGTGCTTTGAAGGAAAACCTCTGTTTGAGTTTGACCGGGCCCGGATGTTCAGATCTGGGATTGTTGGTTTTACTCTTCATGGTTCTCTTTCTCATTACTATTACCATTTTTGCGAGGACCTATTTCCCTACAAAGAATGGTGGGTGGTTCCTGCTAAAGTTGTCTTTGATCAAACTGCTTGGTCAGCAGTTTGGAACAGCATATATTATACAGTTGTTGCAATACTACGTCTTGATCCGCCTATCAGTATTTTAAATGAATTGAAGGCTACGTTCTTTCCCATGTTGACGGCAGGTTGGAAGCTGTGGCCATTTGCACATCTCATAACCTATGGTGTGATACCAGTTGAGCAAAGACTTCTTTGGGTGGATACCGTAGAGCTTGTTTGGGTGACCATACTTTCAACATTTTCAAATGAAAAATCAGAAGCAAAAAGCTCCGAGTCTATGATTCCTACAGAAGTGATATCCACCACATCTGTTCATCCTCCTGAGGAGTAA 1137 0.4837 MASVHSTVAPRAFLPSISKPKLKAPHTKSFAGAGAHDFPRFSRSRIFSGNNRAVAASAAGEEFDVISVQSNDITDQQEGVLVSRVEIDGADGELVTQVNGFGANDGLLSLEGFSSSSAPSSSALVGSESEEDEEKLIDRTINATIVLAAGTFAVTKLLTIDSDYWHGWTLYEILRYAPQHNWSAYEEALKTNPVLAKMMISGIVYSVGDWIAQCFEGKPLFEFDRARMFRSGIVGFTLHGSLSHYYYHFCEDLFPYKEWWVVPAKVVFDQTAWSAVWNSIYYTVVAILRLDPPISILNELKATFFPMLTAGWKLWPFAHLITYGVIPVEQRLLWVDTVELVWVTILSTFSNEKSEAKSSESMIPTEVISTTSVHPPEE 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g02681 378 Pfam Mpv17 / PMP22 family 295 347 IPR007248 GO:0016020
Viun5g02681 378 MobiDBLite consensus disorder prediction 357 378 - -
Viun5g02681 378 MobiDBLite consensus disorder prediction 357 372 - -
Viun5g02681 378 PANTHER PEROXISOMAL MEMBRANE PROTEIN 2, PXMP2 MPV17 181 348 IPR007248 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g02681 Viun-Chr5 38206318 38209497 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g02681 185 353 Miscellaneous Gene Families AT2G14860 26.036 1.53e-15 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g02681 K13348 - gmx:100805057 621.313
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun5g02681 5 38206318 38209497 Viun5g02681 5 38206318 38209497 ECH