Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g02636 ATGGAGGAGCAATCACTGAATATTCCCAAAACCTTCGTGTACGACACTCTCAGTCCCCTCGCTCTATCAGCCGCCGATTCCCCATTTCCCGACAACGGCGAATCCTATTCCGTATTTCGCAACGAGATTTCAGTCGACACTCCCCAACGCGCCTCTCCCTCGACGACCACCGTTGATTTCTTCTCCCTCGACGTTGCTTCGGAGGCCTACGGCGGCGTCTCCCTCCCACAGCCGCTCGCTGCAGTGCCCGAACCGAAGACGCCCACTCCTGTGCCCGAGGCGAAGCTCGAGAGCGTCTGGTTCGGCGGGAATGGCAAATTTAAAAGTCCTATGCTTCAACTGCATAAAGAGATAGTGGATTTTTGTGAGTTTTTGTCACCAACTGTTGAAGAGAAAGCTGCACGGGACATGGCAATAGAATCCGTGTTTGGAGTTATAAAACATATATGGCCTCATTGCCAGGTGGAAGTGTTTGGGTCTTTCAGGACAGGGCTGTATCTTCCCACCAGTGATATTGACGTTGTGATTCTGAAATCAGGCTTGCCAAATCCACAGATTGGACTGAATGCAATTTCTAAAGCCTTATCCCAAAGGAACATGGCTAAAAAGATTCAGGTCATTGGAAAGGCGCGGGTACCAATTATTAAATTTGTTGAGAAGAAGAGTGGTCTTGCATTTGATATAAGTTTTGACATTGACAATGGACCCAAAGCGGCTGAGTATATTCAGGAAGCTGTACTTAAGTGGCCACCTCTAAGGCCCCTGTGTTTGATTTTGAAAGTATTTCTGCAGCAAAGAGAGCTAAACGAGGTATATTCTGGTGGGATTGGCTCGTATGCCCTTCTTGCCATGCTGATGGCAATGTTGCGGAATCTTCGCCTGAGCCAAGCTTCTGCAGAGCACAACCTGGGAGTCCTTTTGGTGCAGTTTTTTGATTTCTATGGACGCAAATTGAACACATCAGATGTTGGTGTGTCCTGTAATGGGACAGGCACTTTTTTTTTGAAAAGTAGTAAAGGGTTTTTAAACAAATCACGGCCAAGTCTTATTTCCATTGAGGATCCTCAGGCACCAGAAAATGACATTGGGAAGAACTCCTTTAATTATTTCCAGATTAGGTCAGCTTTTTCAATGGCATTTAAAAATTTGACAAATCCCAAGATAATCATGGGCTTAGGACCGAACAGGAGCATTCTGGGGACTATAATTAGACCAGATCCTGTTTTGCTGGGGCGTAAAGGTGGCTTGAACGGGGATGTGACTTTTGATAAGTTGCTTCCTGGTGCTGGCGAGCCATTACAACAACAGTATGGAGAACAGGATATGTTATGCAATTGGCAGTTAGATTATGAAGAAGAACCACTACCACGAGGAGGCGACGCTAGTGCAGAGCCTAGCTCACGTTCAACAAAGAAGAGAAAATCTGGTTCAAAGAATTCCAGTAAGAAGCTAAAGGAAAATGATAGTATTCAGATAAAAGGGAATGAGGAGAATGAATCTAGAAAAGAGAAGGATAAAAAAAAGAGAAGAAAGAGAAAATCTCAACTAGGAGACAACGGTTCTTAG 1566 0.4508 MEEQSLNIPKTFVYDTLSPLALSAADSPFPDNGESYSVFRNEISVDTPQRASPSTTTVDFFSLDVASEAYGGVSLPQPLAAVPEPKTPTPVPEAKLESVWFGGNGKFKSPMLQLHKEIVDFCEFLSPTVEEKAARDMAIESVFGVIKHIWPHCQVEVFGSFRTGLYLPTSDIDVVILKSGLPNPQIGLNAISKALSQRNMAKKIQVIGKARVPIIKFVEKKSGLAFDISFDIDNGPKAAEYIQEAVLKWPPLRPLCLILKVFLQQRELNEVYSGGIGSYALLAMLMAMLRNLRLSQASAEHNLGVLLVQFFDFYGRKLNTSDVGVSCNGTGTFFLKSSKGFLNKSRPSLISIEDPQAPENDIGKNSFNYFQIRSAFSMAFKNLTNPKIIMGLGPNRSILGTIIRPDPVLLGRKGGLNGDVTFDKLLPGAGEPLQQQYGEQDMLCNWQLDYEEEPLPRGGDASAEPSSRSTKKRKSGSKNSSKKLKENDSIQIKGNEENESRKEKDKKKRRKRKSQLGDNGS 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g02636 521 FunFam Poly(A) RNA polymerase cid14 229 385 - -
Viun5g02636 521 PANTHER POLY(A) RNA POLYMERASE 103 486 IPR045862 GO:0043631|GO:1990817
Viun5g02636 521 CDD NT_PAP_TUTase 134 244 - -
Viun5g02636 521 Pfam Cid1 family poly A polymerase 302 360 IPR002058 -
Viun5g02636 521 Pfam Nucleotidyltransferase domain 146 243 IPR002934 GO:0016779
Viun5g02636 521 MobiDBLite consensus disorder prediction 480 504 - -
Viun5g02636 521 Gene3D - 109 385 - -
Viun5g02636 521 MobiDBLite consensus disorder prediction 453 521 - -
Viun5g02636 521 SUPERFAMILY PAP/OAS1 substrate-binding domain 250 388 - -
Viun5g02636 521 Gene3D Beta Polymerase, domain 2 127 235 IPR043519 -
Viun5g02636 521 FunFam non-canonical poly(A) RNA polymerase PAPD5 127 235 - -
Viun5g02636 521 SUPERFAMILY Nucleotidyltransferase 111 262 IPR043519 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g02636 K03514 - gmx:100811320 812.372
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun5g02636 5 37619190 37626171 Viun5g02636 5 37619190 37626171 ECH