Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g02477 ATGGCAAAGGGAACAAGCTCAAAACTGAACATCGCAATAATTCACCCGGATCTTGGCATAGGTGGAGCTGAGAGATTGATTGTGGATGCTGCTGTTGAGCTTGCATCCCAGGGCCATAAAGTTCATGTTTTTACTGCACATCATGACAAAACTAGATGCTTTGAAGAAACTGTTGCTGGTACCTTTCCAGTCACTGTTTATGGTTCGTTTCTTCCTCGTCATGTGTTCTACCGTCTTCATGCCTTGTGTGCATACCTTCGGTGCCTATTTGTTGCTCTCTGTGTACTTTTCATGTGGCATTCATTTGATGTTGTACTGGCAGATCAAGTCTCTGTAGTTATTCCTATCTTCAAACTCAAAAGGTCAATAAAGGTTGTATTCTACTGTCATTTTCCGGACTTGTTACTGGCTCAACATTCAACTTTCATTAGGAGGATGTATAGAAAACCGATTGACTATGTAGAAGAAATAACGACTGGAATGGCTGATTTGATACTTGTTAACAGCAACTTCACTGCCTCTACTTTTGCAAATACTTTTAAGTCTCTAGATGCTAAAGGAATTCGACCAGCTGTTCTATATCCAGCTGTCAATGTGGATCAGTTCAAAGAACCCAGTTCCTATAAGCTGAATTTTCTTTCCATCAATCGCTTTGAAAGGAAGAAGAACATACAGTTAGCTATTTCAGCTTTTGCTATGCTTCACTCACCCGAAGGAAATGTTCAGCACAAAGATATTACTAATGCTTCTTTGACTATAGCTGGTGGCTTTGACAAACGGTTGAAGGAGAATGTAGAATACTTAGAAGAGCTTAAAGATTTAGCAGAAAAGAAAGGAGTCTCTAGTAAAATAAGATTCATCACTTCTTGCCCTACTGATGAAAGAAATGCACTTCTTTCAGAATGTCTATGCGTTCTTTACACACCAAAGGATGAGCACTTTGGCATTGTCCCTCTGGAGGCAATGGCAGCTTATAAACCTGTTATTGCATGCAACAGTGGTGGCCCTGTGGAGTCAATTAAGAATGGTGTAACGGGATTCCTTTGTGATCCTACACCTCAAGAGTTTTCTTCAGCAATGGCTAAACTCATAAATGATCCTCAGGAGGCAGAGAAAATGGGCAGAGAAGCTAGGAGGCATGTTGATCAGTCATTCTCTACAAAGTCATTTGGCCAGCATCTAAATAGATACCTTGTTGACATTCATAGAGGAAAAGAGGATTGA 1224 0.4036 MAKGTSSKLNIAIIHPDLGIGGAERLIVDAAVELASQGHKVHVFTAHHDKTRCFEETVAGTFPVTVYGSFLPRHVFYRLHALCAYLRCLFVALCVLFMWHSFDVVLADQVSVVIPIFKLKRSIKVVFYCHFPDLLLAQHSTFIRRMYRKPIDYVEEITTGMADLILVNSNFTASTFANTFKSLDAKGIRPAVLYPAVNVDQFKEPSSYKLNFLSINRFERKKNIQLAISAFAMLHSPEGNVQHKDITNASLTIAGGFDKRLKENVEYLEELKDLAEKKGVSSKIRFITSCPTDERNALLSECLCVLYTPKDEHFGIVPLEAMAAYKPVIACNSGGPVESIKNGVTGFLCDPTPQEFSSAMAKLINDPQEAEKMGREARRHVDQSFSTKSFGQHLNRYLVDIHRGKED 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g02477 407 Coils Coil 258 278 - -
Viun5g02477 407 Pfam Glycosyl transferases group 1 209 379 IPR001296 GO:0016757
Viun5g02477 407 Gene3D Glycogen Phosphorylase B; 211 385 - -
Viun5g02477 407 PANTHER ALPHA-1,3/1,6-MANNOSYLTRANSFERASE ALG2 5 402 IPR027054 GO:0004378|GO:0006486
Viun5g02477 407 FunFam alpha-1,3/1,6-mannosyltransferase ALG2 6 204 - -
Viun5g02477 407 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 10 396 - -
Viun5g02477 407 FunFam alpha-1,3/1,6-mannosyltransferase ALG2 205 386 - -
Viun5g02477 407 CDD GT4_ALG2-like 9 394 - -
Viun5g02477 407 Gene3D Glycogen Phosphorylase B; 5 210 - -
Viun5g02477 407 Pfam Glycosyltransferase Family 4 20 200 IPR028098 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g02477 1 407 Glycosyltransferase AT1G78800 76.284 0.0 662
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g02477 K03843 - gmx:100809168 765.763
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun5g02477 5 35456058 35459600 Viun5g02477 5 35456058 35459600 ECH