Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g02473 ATGGAATCGGTGAAGCCATTGGCCGTGACCCCGAGAAAGAAGCTGGCACGGAGTTTTGCGAAGGTTCTTCATGTGAAAGCACTGATTGGGATTGCCTCTGTTGATGGGTTGAAGAATGTTATATCTGATGCAAATCTCAAGGATGAAGGGAACATGGGAAAGAGTAATAAGAGTTCACTGAATTGGTCCGAGTCTTTCGTTGAAGATGATGATGAAGAGGTTCAGGAGAGAAAGGCCAATGAAGCTCTTCTAGCAAAGCTTTTTGCTAGCATTTCAGTTGTTAAAGGTGCATACGCTGAGCTGCAATATTCTCAGTCACCTTTTGACCCTGATGGGATCGAAGCTGCTGATCAATTGCTAGTGTCTGAGTTGAAGAACTTGTCTGAGCTGAAACAATGTTTCCTGAAGAAACAGTTTGACCCTTCGCCCGAGCGAGCTATTCTCGAGGCTGAATCCAAGGAGCTGCAGGGTGTGATCAAAACATATGAGATCACGGGGAAGAAGCTAGAGTCACAGGTGCGGCTCAAGGATTCTGAGGTTATTTTTCTTAGGGAAAAGTTAGAGGAAGCCAATAAGCGTAACAAGGCAATTGAGAAGAGATTGAATCAAAGTGGCCAACTAGCAGTGCTTGATAATGTTCACATATCAGGGTTAAGTCCTAACCATTTTATCACAGTTCTTCGGCATGCGGTTAGGTCTATCCGCAACTTCGTGAGGGTGATTGTGGATGAGATGAGATCTGCAGATTGGGATGTTGATGCTGCAGTGAATGCCATTGAGCAGGACGTGGTTTATATAGCAGAAGATCACAAGTGTTTTGCAATTGAGGCATTTGTTTGCAGAGAGATGTTCGATGCTTTCCACTTCCCCAACTTTTCTCTGTCAAAAGAGTCTCTCCCTGATAGAAGCAGGAGGCAACAGTGGTTCTTTGGGAGGTTCAATGAGATGAAATCCATGAAAGCAAAGGAGTTCCTCGCAGAGAAGCCAAGATCATCATTTGCAAAGTTTTGCAGGGTGAAGTACTTGAAACTGGTTCATCCCAAGATGGAGTCATCATTTTTTGGCAACATGAATCAGAGAAACCTTGTGAATGCTGGAGGGTTTCCAGACACTGCATTCTTCACATCATTTGCTGAGATGGCCAAGAGGGTGTGGCTTCTACACTGCTTGGCCTTCTCTTTGGAGCCACAAGCTTCAATCTTTCAAGTGGGGAAAGGGTGTAGATTCTCTGATGTGTACATGGAAAGTGTGAATGATGAAATCTTCCTCTATTCAGAAGTGGAATCAGATCCACAAGTTGCTTTCACAGTAGTTCCGGGGTTTAGGATTGGTAAAACTGTTATACAGTGTCAAGTGTACCTCTCACAGCACCAAAGCAAGGCAAAAAAAATCAGTTCCACAAAGCAAAGGTGA 1413 0.4416 MESVKPLAVTPRKKLARSFAKVLHVKALIGIASVDGLKNVISDANLKDEGNMGKSNKSSLNWSESFVEDDDEEVQERKANEALLAKLFASISVVKGAYAELQYSQSPFDPDGIEAADQLLVSELKNLSELKQCFLKKQFDPSPERAILEAESKELQGVIKTYEITGKKLESQVRLKDSEVIFLREKLEEANKRNKAIEKRLNQSGQLAVLDNVHISGLSPNHFITVLRHAVRSIRNFVRVIVDEMRSADWDVDAAVNAIEQDVVYIAEDHKCFAIEAFVCREMFDAFHFPNFSLSKESLPDRSRRQQWFFGRFNEMKSMKAKEFLAEKPRSSFAKFCRVKYLKLVHPKMESSFFGNMNQRNLVNAGGFPDTAFFTSFAEMAKRVWLLHCLAFSLEPQASIFQVGKGCRFSDVYMESVNDEIFLYSEVESDPQVAFTVVPGFRIGKTVIQCQVYLSQHQSKAKKISSTKQR 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g02473 470 Coils Coil 180 207 - -
Viun5g02473 470 Pfam Plant protein of unknown function (DUF641) 76 200 IPR006943 -
Viun5g02473 470 PANTHER PROTEIN GRAVITROPIC IN THE LIGHT 1 13 455 IPR040225 GO:0009639|GO:0009959
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g02473 Viun-Chr5 35330859 35332966 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g02473 - - gmx:100810236 818.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun5g02473 5 35330859 35332966 Viun5g02473 5 35330859 35332966 ECH