Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g02466 ATGAAAAATCACATTCTCTTCCTGTTCTTTCTAATTGCACTTGCCCCCACTTTCTCTCTCCGCTTTCAACCTCACGCTGCTCCTGCAGGGCCCTTGATTAAGCATCTGTCTTCGATCATCAAATGGACAAGGTCTACCTCCAAGACGCCACAATCAGATGGGAATGTTCTTCAATTTGAAAATGGTTACGTGGTTGAGACTGTTGTCGAAGGGAACGAGATTGGGGTCATCCCTCATAGGATCCGTGTCTCTGAGGAGGATGGTGAACTCTTTGCTGTTGATGCAATTAATAGCAACATTGTTCGGATAACTCCGCCGTTGTCCCAATATAGTAGAGGAAGATTGGTGGCAGGGTCATTTCAGGGATACACTGGTCATGTGGATGGAAAACCAAGTGATGCTCGTTTCAATCATCCCAAAGGCATAACAGTGGATGATAAGGGGAATGTTTATGTTGCTGATACTCAGAATCTTGCTATCAGAAAGATTGGAGATTCTGGTGTGACGACCATTGCTGGTGGAAAATCAAATGTCGCAGGATACAGAGATGGGCCTAGTGAGGATGCCAAGTTCTCGAATGATTTTGATGTGGTATATGTTCGACCCACCTGTTCCTTGTTGGTCATTGATAGAGGAAATGCTGCTCTTCGGCAAATCTCTCTTGACCAGGAAGACTGTGATTATCAGTCTAATTCAATTTCCAGTACAGATATCCTTACAGTTGTTGGTGCTGTTATAGTAGGATATGCTACATGTATGCTTCAGCAGGGATTTGGATCCTCTTTCTTCTCAAAAACAAGACCATCAGAAAAAGAGTTTAAAGGACCAGCAAGCAATGAGAAACACATGCCAATCCTGGAGAGCAGTAAAGAGGAGCCGGGATGGCCGTCTTTTGGACAGCTCATTGTTGATCTTTCTAAGCTTTCCCTTGAAGCATTAGCTGGTGCATTCACTCAATTCATACCTTCACATTTCAGACCTGACATCTCCAAGAGAGGCTTAACACCGCTGAAAGATCGTCTTGTGATGCCTGAAGATGAAGCACAGCCTCCATTGATCAACAGGCAAAATGTTCAAGGGCATACACCTCTTACCAAAAATCAGCTGCCACCACAGCTCCACACTCCTCTTAGTGATAGTCGGATGGCACCACATGTTCATACTCCTCCTATCGATAATCGACTCGTGCCAAATGTCCATACTCCAAGCACAGCAGAGAAATATTCAGAAATGAAGCCCCCCAAGATAAAATCAAGCAGTTTCAAGGACCCTTCTCTGTCAAGCAAGCACCGATCATCAAAACGACCCGATTATGCAGAGTTTTATGGATCTACTGAGATTCCTCCGTACTCCAAATCTAAGAGCCAGAAAGAAAGGCCAAGACATAGGCAAAGAGAAAAGAGTGGAGAATTTGTTATGGGGGCAGTTGGAACTGAGGCTAAAGCTGTTGAACCAAGGGCTGTTGACCATAATAATCCAAAGTTTGACCATTACAGTATGAGGACTAAGTATGCTTCTGAGGAGACCTTCCGATTCAACTCCAAGTAA 1548 0.4425 MKNHILFLFFLIALAPTFSLRFQPHAAPAGPLIKHLSSIIKWTRSTSKTPQSDGNVLQFENGYVVETVVEGNEIGVIPHRIRVSEEDGELFAVDAINSNIVRITPPLSQYSRGRLVAGSFQGYTGHVDGKPSDARFNHPKGITVDDKGNVYVADTQNLAIRKIGDSGVTTIAGGKSNVAGYRDGPSEDAKFSNDFDVVYVRPTCSLLVIDRGNAALRQISLDQEDCDYQSNSISSTDILTVVGAVIVGYATCMLQQGFGSSFFSKTRPSEKEFKGPASNEKHMPILESSKEEPGWPSFGQLIVDLSKLSLEALAGAFTQFIPSHFRPDISKRGLTPLKDRLVMPEDEAQPPLINRQNVQGHTPLTKNQLPPQLHTPLSDSRMAPHVHTPPIDNRLVPNVHTPSTAEKYSEMKPPKIKSSSFKDPSLSSKHRSSKRPDYAEFYGSTEIPPYSKSKSQKERPRHRQREKSGEFVMGAVGTEAKAVEPRAVDHNNPKFDHYSMRTKYASEETFRFNSK 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g02466 515 MobiDBLite consensus disorder prediction 347 495 - -
Viun5g02466 515 SUPERFAMILY NHL repeat 57 221 - -
Viun5g02466 515 Gene3D - 35 221 IPR011042 -
Viun5g02466 515 MobiDBLite consensus disorder prediction 352 375 - -
Viun5g02466 515 PANTHER - 29 504 - -
Viun5g02466 515 Pfam NHL repeat 136 162 IPR001258 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g02466 Viun-Chr5 35192843 35197544 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g02466 - - vra:106778116 988.793
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun5g02466 5 35192843 35197544 Viun5g02466 5 35192843 35197544 ECH