Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g02224 ATGGGTTATCTTCAATTTGGCAGACATGGTGTTAGGCAGATCGTTAGATCTAGAGATATCAGTTATGATAATGTTGTGGTAAACCCACTCCTGTTTGCTTCACAAGGGCTTCGTTACAAGAGGAAGCTCCAAGTCATCCTTACAACTGACATAGATAAGCTGGGAAAGGCAGGTGATACTGTCAAGGTTGCCCCTGGATATTTTCGCAACCACCTAATGCCCAAGCTCCTTGCGTTCCCTAACATCGATAAGTTTGCTTATCTTCTCAACGAGCAGCGCAAGATCTATCAACCAACTGAGGAAGAAAAACAAGAAGATCTCACTGTAGTTAAAGAGTCAAAGGAAGATATGATGAAAGAGTATGAAAGAGCTGCACTACGTCTTGATAAAGCTAAGCTGGTCTTGCGAAGGTTAATTGATGTTCAAAAGGCCAAGTCACGTGAATCCAAAGCTGACCCCTTGGAGTTACGTTTTCCTGTGACAAAAGACAATCTTGTGGCTGAGGTGGCGAGACAACTTTGCGTGAACATTGCACCTGATAACCTGCATCTTCCATCACCTTTATCGACATTGGGAGAATATGAGGTGCCACTACGATTACCAAAATCCATCCCCCTGCCAGAGGGCAAGGTTAACTGGAGTTTGAAAGTTAAAGTCAGGAGTAAATAA 669 0.4335 MGYLQFGRHGVRQIVRSRDISYDNVVVNPLLFASQGLRYKRKLQVILTTDIDKLGKAGDTVKVAPGYFRNHLMPKLLAFPNIDKFAYLLNEQRKIYQPTEEEKQEDLTVVKESKEDMMKEYERAALRLDKAKLVLRRLIDVQKAKSRESKADPLELRFPVTKDNLVAEVARQLCVNIAPDNLHLPSPLSTLGEYEVPLRLPKSIPLPEGKVNWSLKVKVRSK 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g02224 222 FunFam 50S ribosomal protein L9 116 220 - -
Viun5g02224 222 Gene3D - 43 106 IPR036935 -
Viun5g02224 222 PANTHER 50S RIBOSOMAL PROTEIN L9 27 219 IPR000244 GO:0003735|GO:0005840|GO:0006412
Viun5g02224 222 FunFam 50S ribosomal protein L9 43 105 - -
Viun5g02224 222 SUPERFAMILY Ribosomal protein L9 C-domain 159 204 IPR036791 -
Viun5g02224 222 Gene3D - 119 221 IPR036791 -
Viun5g02224 222 SUPERFAMILY L9 N-domain-like 43 96 IPR009027 -
Viun5g02224 222 Coils Coil 111 134 - -
Viun5g02224 222 Pfam Ribosomal protein L9, N-terminal domain 44 79 IPR020070 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g02224 Viun-Chr5 28675582 28678809 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g02224 K02939 - gmx:100778112 416.001
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun5g02224 5 28675582 28678809 Viun5g02224 5 28675582 28678809 ECH