Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g02215 ATGGGAACCTCGTTAGCGTCGTTGCAAAGCTGGGTTATTTTGCCATTCTTCTTCATGTTCCTGGCCATCTACCTCGTCGGCTACTTCATCGTTTTCCGCAAACAGTCCACCAAGATCCGACCCGAATTCTCCAGCTGCCTGATCTCGATCTTCCACGGCACCCCCGCCGCGCTTCTCGGCAGTGCCGCCCTTCTCACCGACGACCAGCGGGGCTTCGCAGCGCCCACCACCGCCTTCCAGAAGCTGGTCCTTGATTTCAGCGCCGCCTACTTCCTAACGGATCTGCTCCACTATGTGGCCTTCTACCCGAGCGACGTGCTCTTCATCGCGCACCACGTGGCTACGCTCTTCGTTGTCCTCACGTGCCGTCACGCCGTATCGCACGGGGCCTTCTCCGTCCTCGTGCTCCTCGTACTCGCCGAGGTCACCAGCGCGTGCCAGAACGCGTGGACCCTGGCCGGCGCGCGCCGTCGCGAGGATCCCTTTGCTGCGAGGTTCTACGACGCGCTCTCGCCGCCGTTTTATGCGGTTTACTCCGTTGTGAGGGGCTTCATTGGGCCCTACTTCATGTACCGGATGGTGACGTTCTACGCGAGTGGGGGCGCGCGTGGGCTTGTTCCCGCTTGGGCCTGGGTCTCGTGGGTTTTGGTGGTGGTCATGGCCATTGGGGTTAGTATCATGTGGATTTCTAATCTTTGGATTCAGTTTTTTAGGGAAAGAAGGGGCAAATTGTTAGAACAGAAAATTAGATAA 753 0.583 MGTSLASLQSWVILPFFFMFLAIYLVGYFIVFRKQSTKIRPEFSSCLISIFHGTPAALLGSAALLTDDQRGFAAPTTAFQKLVLDFSAAYFLTDLLHYVAFYPSDVLFIAHHVATLFVVLTCRHAVSHGAFSVLVLLVLAEVTSACQNAWTLAGARRREDPFAARFYDALSPPFYAVYSVVRGFIGPYFMYRMVTFYASGGARGLVPAWAWVSWVLVVVMAIGVSIMWISNLWIQFFRERRGKLLEQKIR 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g02215 250 ProSiteProfiles TLC domain profile. 38 246 IPR006634 GO:0016020
Viun5g02215 250 SMART lag1_27 38 241 IPR006634 GO:0016020
Viun5g02215 250 PANTHER GLABROUS1 ENHANCER-BINDING PROTEIN-LIKE 2 6 244 IPR040327 -
Viun5g02215 250 Pfam TLC domain 42 233 IPR006634 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g02215 Viun-Chr5 28497917 28499212 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g02215 - - gmx:100820193 415.616
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun5g02215 5 28497917 28499212 Viun5g02215 5 28497917 28499212 ECH