Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g02212 ATGGGAACCCAGACTCCAACTACTCAAAAGTTTGATTCCTCAGAACAAGAGAGCGACAAGAGAACTGCGGAGCAGAAAGCAATCGATGATTGGCTTCCCATAACTTCTTCAAGGAACGCAAAATGGTGGTACTCAGCTTTTCACAACGTCACTGCCATGGTAGGAGCTGGAGTTCTCAGCCTTCCTTCTGCCATGGCAAGTCTTGGATGGGGTCCTGGTGTGGTTATTCTTGTGCTGTCATGGATTATCACTCTGTACACACTGTGGCAAATGGTTGAGATGCATGAGATGGTGCCCGGGAAAAGGTTTGACAGGTACCATGAACTGGGGCAGCATGCTTTTGGGGAAAAACTGGGACTGTGGATTGTGGTGCCTCAGCAACTGATATGTGAGATTAGTGTGGACATTGTCTACATGGTGACCGGAGGAAAGTCACTGCAGAAAATTCACGACCTTGTCTGCAAAAATAACTGCAATAACATGAAGACATCTTACTTCATCATCATCTTTGGCTCTGTTCATTTTGTTCTCTCTCACCTTCCCAACTTCAATGCCATCTCTGGCATTTCTTTGGCTGCCGCAATCATGTCTCTCAGTTACTCAACGATTGCATGGGTGGCTTCGGTGGAGAAGCATGTTGGAAATCCTCACAAAGAGGTGGAATATGGGTACAAGGCGAGCAGTTCAGCAGGAACATTTTTCAACTTTCTGAATGCCTTGGGTGATGTGGCTTTTGCCTATGCTGGACACAATGTGGTGTTGGAGATTCAAGCAACCATCCCTTCAACCCCAGACAAACCTTCAAAGGGTCCCATGTGGTGGGGAGTTTTGGTGGCCTACACAGTTGTCGCCTTGTGTTACTTCCCTGTTGCTCTCATTGGCTATTGGGTCTTTGGCAACTCTGTTGATGACAACATCCTCATCTCCCTCAACAAACCCACTTGGCTCATAGTAACTGCTAACATGTTTGTCGTCATCCATGTCATAGGAAGCTACCAGCTCTATGCAATGCCGGTTTTTGACATGATTGAAACATTGATGGTCAAACAATTGCGTTTCAAGCCAAGCTGGTGGCTACGATTTGTGGAGCGCAATGTTTATGTTGCATTTACTTTGTTTGTGGCCATCACTTTCCCTTTCTTTGGTTCCCTTCTCGGATTTTTTGGAGGATTCGCATTTGCTCCAACAACATACTTTCTCCCGTGTATTATGTGGCTTGCTATTTACAAACCTAGGAAGTTCAGCTTATCCTGGATCACCAATTGGATTTGCATTATACTTGGCTTCCTACTCATGATTCTAGCACCAATCGGCGGATTAAGGAGCATCATACTCAATGCCAAACACTATGGGTTTTACCAATGA 1365 0.4549 MGTQTPTTQKFDSSEQESDKRTAEQKAIDDWLPITSSRNAKWWYSAFHNVTAMVGAGVLSLPSAMASLGWGPGVVILVLSWIITLYTLWQMVEMHEMVPGKRFDRYHELGQHAFGEKLGLWIVVPQQLICEISVDIVYMVTGGKSLQKIHDLVCKNNCNNMKTSYFIIIFGSVHFVLSHLPNFNAISGISLAAAIMSLSYSTIAWVASVEKHVGNPHKEVEYGYKASSSAGTFFNFLNALGDVAFAYAGHNVVLEIQATIPSTPDKPSKGPMWWGVLVAYTVVALCYFPVALIGYWVFGNSVDDNILISLNKPTWLIVTANMFVVIHVIGSYQLYAMPVFDMIETLMVKQLRFKPSWWLRFVERNVYVAFTLFVAITFPFFGSLLGFFGGFAFAPTTYFLPCIMWLAIYKPRKFSLSWITNWICIILGFLLMILAPIGGLRSIILNAKHYGFYQ 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g02212 454 Pfam Transmembrane amino acid transporter protein 39 437 IPR013057 -
Viun5g02212 454 Gene3D Amino acid/polyamine transporter I 35 448 - -
Viun5g02212 454 PANTHER OS05G0424000 PROTEIN-RELATED 30 439 - -
Viun5g02212 454 MobiDBLite consensus disorder prediction 1 24 - -
Viun5g02212 454 FunFam Lysine histidine transporter 1 35 449 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g02212 Viun-Chr5 28413019 28416252 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g02212 12 454 Organic Solute Cotransporters AT1G24400 73.815 0.0 653
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g02212 K26385 - gmx:100790838 792.341
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun5g02212 5 28413019 28416252 Viun5g02212 5 28413019 28416252 ECH