Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g02211 ATGGTTGGTGAACAGAGTGAAGAAGAACTGCAGAGGCAGAAGGCAATTGATGATTGGCTTCCAATTACTTCTTCAAGGAATGCAAAATGGTGGTACTCTGCTTTCCACAATGTGACTGCAATGGTTGGGGCTGGTGTTCTTAGTCTCCCCTATGCCATGTCTGAGCTAGGATGGGGTCCTGGTGTAACTGTACTTGTTCTCTCATGGATCATCACCCTTTACACTCTGTGGCAAATGGTTGAAATGCATGAGATGGTTCCTGGTAAACGTTTTGACAGATACCATGAACTAGGACAGTATGCTTTTGGGGAAAAGCTAGGACTTTATATTGTGGTGCCTCAACAACTTGTGGTTGAAGTTGGAGTGAATATTGTGTATATGGTCACTGGGGGTAAATCCTTGCAGAAGTTCCATAACACTGTGTGTGACAATTGCAAAAAGATCAAGTTGACATTTTTCATTATGATCTTTGCCTCTGTTCACTTTGTATTGTCTCACCTTCCCAACTTCAACTCCATTTCTGGTGTATCTTTGGCAGCAGCAGTTATGTCCCTCAGTTACTCTACAATTGCTTGGGCAGCTTCTGCTCACAAGGGTGTTCAAGAAGATGTACAATATGGTTACAAAGCTAAGAGTACAGCGGGAACAGTGTTTAACTTCTTTAGTGCCCTTGGTGATGTTGCTTTTGCCTACGCTGGACACAATGTGGTGTTGGAAATCCAGGCAACAATTCCGTCTACTCCAGAGAAACCATCCAAGGGTCCTATGTGGAAAGGAGTGATTGTTGCTTACATAGTTGTGGCTCTGTGCTACTTCCCAGTTGCCCTTATTGGTTACTGGATGTTTGGAAATGGGGTTCAAGACAACATTCTCATAAGTCTAGAGAAACCAAAATGGCTCATCGCAATTGCCAACATGTTTGTTGTGATACATGTTATTGGAAGTTATCAGATTTATGCAATGCCAGTGTTCGATATGATCGAAACAGTGTTGGTGAAGAAGTTGAAATTCAAACCCAGTCGAATGCTTCGTTTTATTGTACGGAATTTGTATGTGGCATTAACAATGTTCATTGGTATTATCTTCCCATTCTTTGGTGGTCTCTTAGTTTTTGGAGGATTTGCTTTTGCACCAACGACATATTTTCTCCCTTGTGTCATGTGGCTTGCAATCTACAAACCAAAGAGATTCGGGTTGTCTTGGTGGACCAACTGGATATGCATTGTGTTTGGCCTTTTCTTGATGATTCTATCTCCAATTGGAGGATTGAGGTCGATCATAATCAGTGCCAAGAGCTACGAGTTTTTCTCATAA 1314 0.4201 MVGEQSEEELQRQKAIDDWLPITSSRNAKWWYSAFHNVTAMVGAGVLSLPYAMSELGWGPGVTVLVLSWIITLYTLWQMVEMHEMVPGKRFDRYHELGQYAFGEKLGLYIVVPQQLVVEVGVNIVYMVTGGKSLQKFHNTVCDNCKKIKLTFFIMIFASVHFVLSHLPNFNSISGVSLAAAVMSLSYSTIAWAASAHKGVQEDVQYGYKAKSTAGTVFNFFSALGDVAFAYAGHNVVLEIQATIPSTPEKPSKGPMWKGVIVAYIVVALCYFPVALIGYWMFGNGVQDNILISLEKPKWLIAIANMFVVIHVIGSYQIYAMPVFDMIETVLVKKLKFKPSRMLRFIVRNLYVALTMFIGIIFPFFGGLLGXFGGFAFAPTTYFLPCVMWLAIYKPKRFGLSWWTNWICIVFGLFLMILSPIGGLRSIIISAKSYEFFS 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g02211 438 Pfam Transmembrane amino acid transporter protein 27 422 IPR013057 -
Viun5g02211 438 FunFam Lysine histidine transporter 1 23 433 - -
Viun5g02211 438 Gene3D Amino acid/polyamine transporter I 23 434 - -
Viun5g02211 438 PANTHER OS05G0424000 PROTEIN-RELATED 28 427 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g02211 Viun-Chr5 28379960 28382090 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g02211 41 438 Organic Solute Cotransporters AT5G40780 85.678 0.0 719
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g02211 K26385 - gmx:100791368 799.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun5g02211 5 28379960 28382090 Viun5g02211 5 28379960 28382090 ECH