Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g01200 ATGGAAATGGGAGGTTCTGACGTGGCCGAAACGACGACGAATCAAGGAGAACGGAGTTCGGAGAAGAAGAGTTTGAGAACGGAGGTTGATACTTCAGCACCCTTTGAATCGGTGAAGGATGCGGTCACAATGTTTGGGGGTATTGGTTACTGGAAACCCCTCCACAGTAAGATTAATACGTGTGTGCCTTCTCATTCTGAGCAGCAGCACTCAGCAGAGCTCAGCGCTGAAAAACTGGAGGAGCAGGCTTCAGTGTTGGAGAAAGAACTGATCTTGAAAGAAAGGGAAACTCTTGATGTGTTGAAAGAATTGGAAAGTACCAAAAAGCTTGTTGAAGAATTGAAATCAAAGATACAGAAGGAACAGTCTGAAGTGAATTTGAATCTTCAGCTTGGGGAATGTGATGGAAAATCAGTTGTTGAAGAGAATGAAGAAAAGGAAAACCAAATGAGTCAATTGAATGTTTTTCAACCTTCCAACCAAGGTTTTGCTTCCCATCTTCCATCTGCGCCGGGTGTAATATTACAGGAACTGAAGCAGGCCAAGTTGAATTTATCCAGAACTACTGTTGATCTGGCTGATGTTCGAACTTCTGTAGAATCGCTTAATAAGAAGTTAGAGAAGGAAAGAATCTCACTTGAGAAAACTCGTGAGAGGTTAGCTCAAAATACTTCAAAAATATCTTCTCTTGAGGAAGAGCTAAACCATACCAGATTGAGGCTGCAAGTAGCAAAAGGTGCTGAAATCAAAGATGCTTCAGAGGATCCTTCAGTTATTACTAGAGAGCTCCAGCGACTGAGTTCTGAGGCTGAGAATTTCAAAATAATGGGAGAATCTGCAAAAGCAGAAGTTCTGAGAACTATGTCTGAGATTGAACAGACAAAAACCATGATAAGAACTGCTGAAATCAGATTGGTAGCAGCCAGAAAAATGAAAGAAGCTGCTAGAGCCGCAGAAGCTTTTGCCCTTGCAGAAATTAACGCATTGTCTCATCATGAAAATGAGAGTTTACCTGGAAATCAGATTACCCTTTCATTTGAAGAGTACACGGCTCTGAGATGCAAAGCACGTGATGCAGAGGAACAATCTAGGAAGAGAGTTGCAAATGCAATGCTTGAAGTTGATGAAAGAAATTTGTCAAACATGGAGATTTTGAAAAGGGTAGAAGAAGCTGCAGAGGAAGTTAAAACCAGCAAGAAGGCCCTTGAAGAAGCTCTGGAAAGGGTAGAAGCTGCAAATAGAGACAAGGTAGCGGTTGAAGAGGCTTTAAGGAATTGGCGTTCGGAGGGTCACAAAAGACGCTCTATACAAAACTCCACCAAGTTCAAAAACTCTTGTTCGTCTCATCATTGGAGAGATCCTCGGTTACTCGATGTTAATGGATTGCATCTGGTGAATGATGAAGCCAAGCCAGTTCTAAAGTCAACCCTATCAATAGGACAAATACTTAGCCGAAAGCTGCTTCAACCACAAGAGTTTGAAGCCGGAGAAAGAATCTCAATGAAACAGAATGTGTCTCTGGGTCAGATGCTTGGGAAACAAAACATTGATCCACCAATTGACAACAGACAAGTTGAGAAAGTAACTGGTCGTAAGTTGTTTTCTACCAAGAGAAATAAATTTGGATTTGCACGATTCTCTCACATCTTGTCAAAACAGCAGAAGAATAAGAAGAAGCCAACCCTGAATTTGAGGTGA 1698 0.4164 MEMGGSDVAETTTNQGERSSEKKSLRTEVDTSAPFESVKDAVTMFGGIGYWKPLHSKINTCVPSHSEQQHSAELSAEKLEEQASVLEKELILKERETLDVLKELESTKKLVEELKSKIQKEQSEVNLNLQLGECDGKSVVEENEEKENQMSQLNVFQPSNQGFASHLPSAPGVILQELKQAKLNLSRTTVDLADVRTSVESLNKKLEKERISLEKTRERLAQNTSKISSLEEELNHTRLRLQVAKGAEIKDASEDPSVITRELQRLSSEAENFKIMGESAKAEVLRTMSEIEQTKTMIRTAEIRLVAARKMKEAARAAEAFALAEINALSHHENESLPGNQITLSFEEYTALRCKARDAEEQSRKRVANAMLEVDERNLSNMEILKRVEEAAEEVKTSKKALEEALERVEAANRDKVAVEEALRNWRSEGHKRRSIQNSTKFKNSCSSHHWRDPRLLDVNGLHLVNDEAKPVLKSTLSIGQILSRKLLQPQEFEAGERISMKQNVSLGQMLGKQNIDPPIDNRQVEKVTGRKLFSTKRNKFGFARFSHILSKQQKNKKKPTLNLR 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g01200 565 Coils Coil 196 247 - -
Viun5g01200 565 MobiDBLite consensus disorder prediction 1 32 - -
Viun5g01200 565 Coils Coil 101 124 - -
Viun5g01200 565 Pfam Weak chloroplast movement under blue light 169 433 IPR008545 -
Viun5g01200 565 Pfam Weak chloroplast movement under blue light 27 125 IPR008545 -
Viun5g01200 565 Coils Coil 385 429 - -
Viun5g01200 565 Coils Coil 69 96 - -
Viun5g01200 565 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED-RELATED 28 126 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g01200 Viun-Chr5 8521670 8525085 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g01200 - - gmx:100785049 798.505
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun5g01200 5 8521670 8525085 Viun5g01200 5 8521670 8525085 ECH
Viun5g01200 5 8521670 8525085 Viun10g01424 10 28448345 28451249 PCT