Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g00969 ATGTGGAAGGTTGTGCGATTCGCGGCGTCCAGATCACGGCGATTCTCCACGGCGATTCCCGGGCCGTGCAAGGTCCACAAGCGCGGCACTGATATCCTCCATGATCCTTGGTTCAACAAGGATACTGGTTTTCCCATAACTGAAAGGGATCGATTGGGGCTTCGGGGCCTTCTTCCTCCTCGTGTCATTTCATTTGAGAATCAATATGATCGGTTTATGGATTCATATAGATCTTTGGAGAAGAATACACGGTGCCAATCAGATAAATTTGTTTCCTTATCCAAATGGAGGATCTTAAATAGATTGCATGACAGGAATGAGACTCTGTATTACCGAGTTCTTATCCGTAACATCAAAGAGTTTGCTCCAATAATCTATACTCCTACCGTTGGATTAGTGTGTGAAAATTATTCAGGGTTATTTAGACGCCCGCGTGGAATGTATTTTAGTGCCAAAGATAAAGGAGAGATGATGTCAATGATCTATAACTGGCCATCTGACGAGGTAGACATGATTGTCCTGACAGACGGCAGTCGTATTCTTGGCTTGGGTGACCTTGGCGTTCAGGGCATAGGAATACCTATCGGAAAACTTGATATGTATGTTGCTGCTGCTGGTATCAACCCACGAAAAATACTTCCAGTTATGTTAGATGTTGGTACAAACAATGAAAAGCTACTCAAAGATCCCCTTTATTTAGGAGTTCGACAGCCTAGGTTGGAAGGTGAAGAGTACCTATCGATTGTTGATGAATTCATGGAAGCTGTACACGCTCGATGGCCTAAGGCTATTGTTCAGTTTGAGGATTTCCAAATGAAGTGGGCTTTTGAAACCCTGAATCGATATAGACAAAGGTTTTGCATGTTTAATGATGATATACAGGGCACCGCCGGGGTTGCACTTGCTGGGCTATTGGGAGCTATAAGATCCCAAGGTCGACCATTGTCTGATTTTTTGAAACAAAAGATAGTTGTTGTTGGAGCTGGGAGTGCAGGGCTTGGTGTTCTTAAGATGGCTGCCCAGGCTGTTTCAAGAATGTCAGGGGGCAGTGGAACGGCTACCACTGCTAACAGCCCGTTTTTTTTAATTGATAAAGATGGTCTTGTCACCACGGAAAGGAGCAATCTAGATCCAGCTGCTGTTCCATTTGCCAAAAATCCAAGAGATCTTGAAGGACTTACAGAGGGTGCTAGTATAATTGAAGTGGTTAAGAAGGTTAAGCCACACGTGCTACTTGGATTGTCTGGAGTTGGTGGTGTTTTCGACACGGAGGTGCTTAAGGCAATGAGAGAATCTGCTTCAACAAAGCCTGCTATCTTTGCAATGTCTAATCCCACCGTGAATGCTGAGTGCACTGCTATTGAAGCTTTCAGTCATGCTGGAAAGAATATAGTTTTTGCGAGTGGAAGCCCTTTTGACAATGTAGATCTCGGAAATGAAGTTGGCCATGTCAATCAAGCCAACAATATGTATCTGTTCCCAGGGGTTGGTTTGGGTACACTTCTATCGGGTGCTCGTCATATAACAGACGAAATGTTGCGAGCAGCAGCTGAATGCCTTGCTTCATATATGACAGATGAGGAGGTCCAAAAAGGAATCTTGTTTCCATCTATTGACTGTATTCGGAATGTTACAGCTGAGGTTGGAGCTGCTGTTATTGGTGCTGCGGTTGCAGAAAATCAGGCTGAAGGACATGGTGAAGTAGGGTTGAGAGAACTAGCAAACATGTCAAAAGAGGATACTGTGGAGTATGTGAGAAGCAATATGTGGTTACCTGAGTATTGCCCCCTTGTTCATGAAAAATGA 1806 0.4419 MWKVVRFAASRSRRFSTAIPGPCKVHKRGTDILHDPWFNKDTGFPITERDRLGLRGLLPPRVISFENQYDRFMDSYRSLEKNTRCQSDKFVSLSKWRILNRLHDRNETLYYRVLIRNIKEFAPIIYTPTVGLVCENYSGLFRRPRGMYFSAKDKGEMMSMIYNWPSDEVDMIVLTDGSRILGLGDLGVQGIGIPIGKLDMYVAAAGINPRKILPVMLDVGTNNEKLLKDPLYLGVRQPRLEGEEYLSIVDEFMEAVHARWPKAIVQFEDFQMKWAFETLNRYRQRFCMFNDDIQGTAGVALAGLLGAIRSQGRPLSDFLKQKIVVVGAGSAGLGVLKMAAQAVSRMSGGSGTATTANSPFFLIDKDGLVTTERSNLDPAAVPFAKNPRDLEGLTEGASIIEVVKKVKPHVLLGLSGVGGVFDTEVLKAMRESASTKPAIFAMSNPTVNAECTAIEAFSHAGKNIVFASGSPFDNVDLGNEVGHVNQANNMYLFPGVGLGTLLSGARHITDEMLRAAAECLASYMTDEEVQKGILFPSIDCIRNVTAEVGAAVIGAAVAENQAEGHGEVGLRELANMSKEDTVEYVRSNMWLPEYCPLVHEK 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g00969 601 FunFam Malic enzyme 291 601 - -
Viun5g00969 601 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 293 598 IPR036291 -
Viun5g00969 601 Pfam Malic enzyme, NAD binding domain 293 556 IPR012302 GO:0051287
Viun5g00969 601 ProSitePatterns Malic enzymes signature. 289 305 IPR015884 GO:0004471
Viun5g00969 601 Pfam Malic enzyme, N-terminal domain 103 283 IPR012301 GO:0004471
Viun5g00969 601 Gene3D - 27 290 IPR037062 GO:0004471
Viun5g00969 601 Gene3D - 291 601 - -
Viun5g00969 601 SMART malic_2 103 283 IPR012301 GO:0004471
Viun5g00969 601 SUPERFAMILY Aminoacid dehydrogenase-like, N-terminal domain 14 292 IPR046346 -
Viun5g00969 601 PRINTS Malic enzyme signature 264 282 IPR001891 GO:0004470|GO:0004471
Viun5g00969 601 PRINTS Malic enzyme signature 205 227 IPR001891 GO:0004470|GO:0004471
Viun5g00969 601 PRINTS Malic enzyme signature 109 133 IPR001891 GO:0004470|GO:0004471
Viun5g00969 601 PRINTS Malic enzyme signature 323 339 IPR001891 GO:0004470|GO:0004471
Viun5g00969 601 PRINTS Malic enzyme signature 434 450 IPR001891 GO:0004470|GO:0004471
Viun5g00969 601 PRINTS Malic enzyme signature 169 198 IPR001891 GO:0004470|GO:0004471
Viun5g00969 601 PRINTS Malic enzyme signature 289 305 IPR001891 GO:0004470|GO:0004471
Viun5g00969 601 SMART Malic_M_2 293 557 IPR012302 GO:0051287
Viun5g00969 601 PIRSF ME 5 600 IPR001891 GO:0004470|GO:0004471
Viun5g00969 601 FunFam Malic enzyme 27 290 - -
Viun5g00969 601 PANTHER MALIC ENZYME-RELATED 16 594 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g00969 Viun-Chr5 6369863 6377480 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g00969 K00028 - gmx:100795823 1060.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun5g00969 5 6369863 6377480 Viun5g00969 5 6369863 6377480 ECH
Viun5g00969 5 6369863 6377480 Viun10g01831 10 33275424 33283268 PCT