Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g00780 ATGGCGTCGGTGTTTGTGTACCACGTCGTGGGCGATCTGACGGTGGGGAAGCCAGAGCTGGTGGAGTTTCACGAGAGTGAGACGGTGGAGTCCGCGATTAGGGCGATCGGAGAGTTCCCTGAAGGGAGCATACCCATTTGGAAAAAGAGATCTCATGTGGGGATTGAGAATAGTGAGATGAAGCAGCAGAGGTTTGTTGGAATCCTTAGTTCCTTCGACATAGTTGCGTTTTTGGCTAAGAGTGAGTGTTTGGAGGATCAGGACAAGGCCTTGAAAATTCCTGTTTCTGAGGTTGTTGTTCCTAACAATTCGCTGCTCAGGGTTGTTGACCCTGCTACAAGGTTGATAGATGCACTAGACATGATGAAACAAGGTGTGAAACGATTGCTTGTTCCGAAGAGTGTAGCATGGAAGGGCATGAGTAAGCGATTCTCAGCTATCTACTACGGCAAGTGGAACAAGAATAATGATTCTCCTAGCAACAGCAGCAACAATCTACCTCCTAACATGAATTGGAGCCCCTCAACTTCCGGCACAGTTATCCGTGACAAGTACTGTTGTCTCTCTAGGGAAGATGTTCTTCGTTTCATCATTGGTTGTCTTGGTGCTCTGGCTCCCCTTCCTCTCACTTCCATTGTTTCTCTTGGAGCAATCAATGCAGACTACAGCTACATCGAATCCTCCACTCCAGCCATTGCAGCCACTAAAAAGCTTCCTCAAGATCCAAGTGCAGTTGCTGTGATAGAAAACACATCAGATGGTCAGTGTAAGATCCTTGGAGAAATTTCTGCATGCAAGTTATGGAAATGCGATTACTTAGCAGCAGCATGGGCTTTGGCGAATCTCTCGGCCGGACAGTTTGTCATGGGAGTTGAAGACAATGTTAGCTCAAGATCACTACCCGAGTTCAGTGTAGATTCACCAACTGGAAACAGTGATTTGGTTAATGGTTCGAGGAAACCAAGGAAATTCAGTAGCAGGAGTATTGGGTTCTTCAGCAATTCTGGGAGCCACAGTTTTGGTCCCAGGAGCATGTATAGGGGTAGGAGTGCACCTCTGACATGTAAATTCACTAGTTCGCTTGCTGCAGTTTTGGCTCAGATGCTTTCCCACAGAGCAACTCATGTTTGGGTGACCGAGGACGACAATGACGATGTTTTGGTCGGTGTGGTTGGATATACCGATATTTTAGCTGCTGTAACCAAACCCCCTACAACCATGATTCCTGTTAATAGATCTACAGAGGGGTTTGGAAATGAAATTCAGTGTTGA 1272 0.4662 MASVFVYHVVGDLTVGKPELVEFHESETVESAIRAIGEFPEGSIPIWKKRSHVGIENSEMKQQRFVGILSSFDIVAFLAKSECLEDQDKALKIPVSEVVVPNNSLLRVVDPATRLIDALDMMKQGVKRLLVPKSVAWKGMSKRFSAIYYGKWNKNNDSPSNSSNNLPPNMNWSPSTSGTVIRDKYCCLSREDVLRFIIGCLGALAPLPLTSIVSLGAINADYSYIESSTPAIAATKKLPQDPSAVAVIENTSDGQCKILGEISACKLWKCDYLAAAWALANLSAGQFVMGVEDNVSSRSLPEFSVDSPTGNSDLVNGSRKPRKFSSRSIGFFSNSGSHSFGPRSMYRGRSAPLTCKFTSSLAAVLAQMLSHRATHVWVTEDDNDDVLVGVVGYTDILAAVTKPPTTMIPVNRSTEGFGNEIQC 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g00780 423 Gene3D - 5 134 IPR046342 -
Viun5g00780 423 SUPERFAMILY CBS-domain pair 351 403 IPR046342 -
Viun5g00780 423 CDD CBS_pair_SF 23 131 - -
Viun5g00780 423 ProSiteProfiles CBS domain profile. 345 407 IPR000644 -
Viun5g00780 423 Gene3D - 333 402 IPR046342 -
Viun5g00780 423 SMART cbs_1 351 401 IPR000644 -
Viun5g00780 423 SMART cbs_1 19 79 IPR000644 -
Viun5g00780 423 PANTHER AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT 7 404 - -
Viun5g00780 423 Pfam CBS domain 351 400 IPR000644 -
Viun5g00780 423 SUPERFAMILY CBS-domain pair 6 131 IPR046342 -
Viun5g00780 423 MobiDBLite consensus disorder prediction 300 321 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g00780 - - gmx:100784349 708.753
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun5g00780 5 4889058 4892005 Viun5g00780 5 4889058 4892005 ECH