Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g00768 ATGGCTCCAAGCTTCAACAAACGAAGAATCCTTCCCGCTTTTCGCATTTTCCTTCTACTCTCCCTTTTCTTCAACTTATCATCCACTTTCGCTCAGGATTCTCTCTTGCAGAACGCGAAGGAAGGAGTCGGTGGATCTGTGGATCTCGGTCGCCGCGGCAAAATTGTGTTGGATGAAATAGATAATGGTTCGATCCTTTCTCTTGGCTTGGAATCCACCGGTCCTGGAATCTTCGATGCTTTTTTCGCCAGTTTATCGATGATCCTTGTCAGCGAGATCGGGGATGAGACGTTTATAATAGCAGCTCTTATGGCTATGCGTCATCCTAAGTCAATTGTCTTGTCTGGTGCACTAAGTGCCCTGTTTATAATGACGGTACTTTCTACTGGGCTAGGCAGGATTGTCCCAAACTTGATTTCTAGGAAGCATACAAATAGTGCGGCTACAGTTCTTTATGCTTTCTTTGGGTTAAGGTTACTATATATTGCATGGAGATCAACTGATTCAAAATCCTCCCAGAAGAAAGAAATGGAAGAAGTTGAAGAAAAACTTGAAGGCGGACAAGGGAAAACTTCAGTTCGGCGTTTCTTTTCAAGATTTTGTACACCAATTTTTTTGGAGTCCTTTATTTTAACATTCCTTGCTGAGTGGGGTGATCGTAGCCAGATAGCGACAATTGCACTGGCGACCCACAAAAATGCTCTGGGAGTAGCAGTTGGGGCCTCTTTGGGTCACACCTTCTGTACCTCGCTGGCAGTGGTGGGAGGAAGCATGTTGGCATCTAAAATTTCCCAACGCTCCGTAGCTACTGTTGGTGGCTTGCTCTTTCTCGGCTTTTCCATATCTTCATACTTTTACCCGCCTCTATGA 870 0.4494 MAPSFNKRRILPAFRIFLLLSLFFNLSSTFAQDSLLQNAKEGVGGSVDLGRRGKIVLDEIDNGSILSLGLESTGPGIFDAFFASLSMILVSEIGDETFIIAALMAMRHPKSIVLSGALSALFIMTVLSTGLGRIVPNLISRKHTNSAATVLYAFFGLRLLYIAWRSTDSKSSQKKEMEEVEEKLEGGQGKTSVRRFFSRFCTPIFLESFILTFLAEWGDRSQIATIALATHKNALGVAVGASLGHTFCTSLAVVGGSMLASKISQRSVATVGGLLFLGFSISSYFYPPL 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g00768 289 Coils Coil 170 190 - -
Viun5g00768 289 Pfam Uncharacterized protein family UPF0016 207 279 IPR001727 -
Viun5g00768 289 Pfam Uncharacterized protein family UPF0016 83 156 IPR001727 -
Viun5g00768 289 PANTHER TRANSMEMBRANE PROTEIN HTP-1 RELATED 64 286 IPR001727 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g00768 Viun-Chr5 4815626 4819256 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g00768 K23541 - gmx:100785207 474.552
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun5g00768 5 4815626 4819256 Viun5g00768 5 4815626 4819256 ECH