Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g00751 ATGGCTCTGAATGTCTGTGTTTCTCCTAACCCTAAATGGGTTGCATCTCCTTCCTTAGATAGTGGTTCTTCTTTGAGACCTTCACTTGGGTCTGGTTTTGGTAACATAAACATTCCTAGTGTGAATCTCAACTTGAGTACTAGAACCACAAGTTTGAGTTTGAGAAGAAATTTTAGTGTAAGATCTAGTTTGGAAACTGCAGGGCCCACAGTCACAGTGGGACAAGTCACTGAGGTAAACAAGGACACCTTCTGGCCGATTGTTAAGGCTGCCGGGGATAAAACCGTTGTCCTAGACATGTACACCCAATGGTGTGGCCCTTGCAAAGTCATGGCTCCAAAGTTTCAAGAATTATCAAAGAAGTATGACGATGTTGTCTTTCTAAAGCTTGATTGCAACCAAGACAACAGGCCATTGGCAAAAGAGCTGGGGATTAAAGTGGTTCCCACTTTTAAAATTCTGAAGGACAACAAGGTCGTAAAAGAAGTTACTGGAGCTAAATACGATGATTTGGTTGCTGCCATTGACAATGTTCGATTGAGCTAA 546 0.4231 MALNVCVSPNPKWVASPSLDSGSSLRPSLGSGFGNINIPSVNLNLSTRTTSLSLRRNFSVRSSLETAGPTVTVGQVTEVNKDTFWPIVKAAGDKTVVLDMYTQWCGPCKVMAPKFQELSKKYDDVVFLKLDCNQDNRPLAKELGIKVVPTFKILKDNKVVKEVTGAKYDDLVAAIDNVRLS 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g00751 181 ProSiteProfiles Thioredoxin domain profile. 62 180 IPR013766 -
Viun5g00751 181 SUPERFAMILY Thioredoxin-like 69 178 IPR036249 -
Viun5g00751 181 Gene3D Glutaredoxin 60 180 - -
Viun5g00751 181 PANTHER THIOREDOXIN-LIKE PROTEIN 1 75 176 - -
Viun5g00751 181 Pfam Thioredoxin 76 176 IPR013766 -
Viun5g00751 181 ProSitePatterns Thioredoxin family active site. 97 115 IPR017937 -
Viun5g00751 181 CDD TRX_family 82 176 - -
Viun5g00751 181 PRINTS Thioredoxin family signature 96 104 - -
Viun5g00751 181 PRINTS Thioredoxin family signature 144 155 - -
Viun5g00751 181 PRINTS Thioredoxin family signature 104 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g00751 Viun-Chr5 4682956 4685799 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g00751 K03671 - gmx:100306555 280.796
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun5g00751 5 4682956 4685799 Viun5g00751 5 4682956 4685799 ECH