Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g00748 ATGGCTAAAGCTGGCGGGGTTTGGATTTTGCCGTTGATCGCCGCCTGGTGGTGGCTGTCCACGGCGGCGACGGTGAGGGGTTCGAATTCGACGACGATTTACGACGAGCTTCGGGCGCAGGGTCTTCCGGTGGGGCTTCTTCCGAAGGGAATTGCGAAGTACTCGTTCAACGGAACAAGTGGGGAATTCGAGGTGTGGATGCCGGAACCCTGCAACGCGAAGTTCGAGAACGAGGTGCACTACGATTCCAACATAAAGGGTATCCTCGGATTCGGTCGGATCGGGAAATTGTCCGGTATGTCGGCGCAAGAACTTTTTTTGTGGTTTCCTGTTAAGGGCATTCGTGTGGATGTTCCCACCTCTGGTCTTATACACTTTGATGTCGGTGTTGCGGATAAGCAGTTATCTCTGTCCCTTTTTGAAGACCCTCCTGATTGTAACCCTGAGGTTAATGCTGGTAGTGAAGGTGTGCTGAGGGCTGCTTGGTAG 489 0.5337 MAKAGGVWILPLIAAWWWLSTAATVRGSNSTTIYDELRAQGLPVGLLPKGIAKYSFNGTSGEFEVWMPEPCNAKFENEVHYDSNIKGILGFGRIGKLSGMSAQELFLWFPVKGIRVDVPTSGLIHFDVGVADKQLSLSLFEDPPDCNPEVNAGSEGVLRAAW 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g00748 162 Pfam Protein of unknown function, DUF538 34 141 IPR007493 -
Viun5g00748 162 Gene3D - 17 149 IPR036758 -
Viun5g00748 162 SUPERFAMILY At5g01610-like 12 147 IPR036758 -
Viun5g00748 162 PANTHER T31J12.3 PROTEIN-RELATED 24 146 IPR007493 -
Viun5g00748 162 FunFam Uncharacterized protein At3g07460 19 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g00748 Viun-Chr5 4664794 4667336 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g00748 - - gmx:100778787 254.218
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun5g00748 5 4664794 4667336 Viun5g00748 5 4664794 4667336 ECH