Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g00744 ATGGATGCTATACGGAAGCAGCTCGATGTGTTGATGGGAGCCAACCGTAACGGCGATGTCCGTGAAGTCAATCGCAAGTACTACGATCGCGACGTTTGTCGTCTCTACCTCGTCGGTCTCTGCCCTCACGAACTCTTCCAGTTAACGAAAATGGATATGGGACCTTGCCCTAAGGTGCACTCTCTTCAGCTCCGGAAAGAATACGAGGAGGCAAAGGCGAAAGGCACTGATAATTATGATAGGGAATTGGAGGATGTGATAGACAAGCTTATTGGTGAGTGTGATAGGAAAATTGGCAGGGCTCTCAAGCGGCTCGAGGACGAGGATGCAAAGGCTGCCATTGCGATTTCGGTCTCCGAAGTTACTCAAACCCCTGAGGTGCTTGAGCTGTCTAAGGAAATTAAAGAGAAGTTAAAAGAAGCTGATCAATACGATCTTGAAGGCAAGACAGATCTCAAGATTCGAGCTTTAGAGGTCGTTGAGGAACTTAGAACTAAGAGAGCAGACAAGCAGTCCATGCTTCTTTTAGATGCCTTTAACAAAGATAGGGCATCTTTACCTACACCTCTGCCAAATCCACCACCTTTGGCACCCCTTCCTGTAGTTGCTCCTGATCCTCGAACACAAGAGATGATAAATGAAAAGCTGAAGAAGGCTGAGGATCTTGGTGAACAAGGAATGGTTGATGAGGCTCAAAAAGCATTGGAAGAGGCTGAAGCACTTAAGAAGCTTCCTGCCAGGCAGGAGCCAGTGTTGGATTCATCAAAGTATACAGCAGCAGATGTCCGGATTACCGATCAGAAGCTACGTGTATGTGACATTTGTGGAGCTTTTTTGAGTGTTTATGACAGCGATCGCCGATTAGCTGATCATTTTGGAGGAAAACTTCATTTAGGGTATATGCAGATTCGTGAGAAGTTAGCAGAACTTCAAGAAGAAAGGAACAAAAGCCGAAAGACTGATCGGCATGAGGACAGGAGGTCAAAAGAACGGAGCAGGGATCGAGACAGGGAGTCAAGCAGGGACCGTGAACGTGGTGATAGTCGTGAACGAGGGCGAGACCATGATCGTAGGAGTAGAGACCGGGACAGGCATTATGATAGAGATCGTGGATATGAGCGAGACCGTGACAGAGACTCTGACCGCACTCGCTCCTATGAATCAAGAAGTCGTAGGAGGTCACGCTCTAGATCTCGAGAGCGATCTAGAGATTATGATCGACATAGGCGTCATGATCGATATTAG 1245 0.4739 MDAIRKQLDVLMGANRNGDVREVNRKYYDRDVCRLYLVGLCPHELFQLTKMDMGPCPKVHSLQLRKEYEEAKAKGTDNYDRELEDVIDKLIGECDRKIGRALKRLEDEDAKAAIAISVSEVTQTPEVLELSKEIKEKLKEADQYDLEGKTDLKIRALEVVEELRTKRADKQSMLLLDAFNKDRASLPTPLPNPPPLAPLPVVAPDPRTQEMINEKLKKAEDLGEQGMVDEAQKALEEAEALKKLPARQEPVLDSSKYTAADVRITDQKLRVCDICGAFLSVYDSDRRLADHFGGKLHLGYMQIREKLAELQEERNKSRKTDRHEDRRSKERSRDRDRESSRDRERGDSRERGRDHDRRSRDRDRHYDRDRGYERDRDRDSDRTRSYESRSRRRSRSRSRERSRDYDRHRRHDRY 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g00744 414 MobiDBLite consensus disorder prediction 399 414 - -
Viun5g00744 414 MobiDBLite consensus disorder prediction 312 414 - -
Viun5g00744 414 Coils Coil 300 320 - -
Viun5g00744 414 Coils Coil 127 147 - -
Viun5g00744 414 MobiDBLite consensus disorder prediction 312 388 - -
Viun5g00744 414 Pfam LUC7 N_terminus 209 326 IPR004882 GO:0003729|GO:0005685|GO:0006376
Viun5g00744 414 Pfam LUC7 N_terminus 2 171 IPR004882 GO:0003729|GO:0005685|GO:0006376
Viun5g00744 414 PANTHER RNA-BINDING PROTEIN LUC7-RELATED 1 172 IPR004882 GO:0003729|GO:0005685|GO:0006376
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g00744 Viun-Chr5 4645189 4651284 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g00744 - - gmx:100793888 567.385
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun5g00744 5 4645189 4651284 Viun5g00744 5 4645189 4651284 ECH