Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g00736 ATGCGTTTCTGCCCGTGCTTTGGATCCGACGAGGTCAGGGCAATCGCCGATCGCGACCCGCTTCTGCTGGTTTCGGGTATGGGCGGCTCCATTGTCAATTCCAAGCCCAAGACATTCGGGTTCACCACCCGGGTTTGGGTCAGGCTTCTGCTCGCTGACATGGAGTTCCGGAAGAAGATTTGGTCCCTTTACAATCCAAAAACAGGCTACTGTGAAACGTTGGACAAGAAGTCTAAGCTTGTGGTTCCTGACGATGATCATGGCCTCTATGCGATCGATATTTTGGATCCATCGTGGTTTACGAAGTGTGTGCATTTGACAGAGGTGTATCATTTTCACGACATGATTGAGATGCTTGTTGGATGCGGTTACGAGAAGGGAACCACGCTGTTTGGGTTCGGATATGATTTCCGCCAAAGCAATAGGATTGACAAGTCAATGGAAGGTCTTAAACATAAGTTGGAGACTGCTTACAAAGCTTCTGGTGGAAGAAAAGTCAATTTAATATCGCATTCCATGGGAGGAATTATGATCTTGTGTTTCATGTCGCTTCACAGAGATGTGTTTACAAAATATGTGAATAAATGGATTTGCTTGGCTTGCCCTTTCCAAGGAGCCCCAGGGTGCATCAATGATTCTTTATTAACTGGATTAGAGTTTGTTGATGGCTTTCAAAGCTACTTTTTTGTTAAAAGGTGGACTATGCATCAATTGCTAGTGGAGTGTCCATCAGTCTATGAAATGTTGGCAAATCCATCTTATGGATGGAAAAAGCAGCCAGAAATTCTAGTCTGGCGAAAGCATACAAAGGACGGGGACAATAACACCAATTTGGAATCTTATGGACCAACCCAGAGTATATCTTTATTTGAAGAAGCACTGCGGAATAATGAGCTAAGCTATAATGGGAAAACGATACGGCTTCCCTTTAACTTTGATATACTTGACTGGGCTATTAAAACACGACAACTTATCGCAAATGCTAAATTGCCAGATGGAGTCAGCTTCTATAACATTTACGGGACATCGTTGGACACACCTTTTGATGTTTGTTATGGTTCGGAAGATTCTCCAATTGAGGACTTATCCGAAATTTGCCACACAATGCCACTATATTCTTATGTGGATGGGGATGGAACAGTTCCTACTGAATCTGCGAAGGCTGATGGACTGAAAGCCACCGAAAGGGTGGGAGTTGGTGCTTCTCATCGTGGAATATTACGAGATGAGACAGTATTTCAACATATTCAAAAATGGTTGGGTGTTGAACCAATGGTTAGCAAGCAATCTAAAACATCTAAAGTTGCAGATGCTGGTCGAATCGTGCCTATGGTTCTATAA 1341 0.4333 MRFCPCFGSDEVRAIADRDPLLLVSGMGGSIVNSKPKTFGFTTRVWVRLLLADMEFRKKIWSLYNPKTGYCETLDKKSKLVVPDDDHGLYAIDILDPSWFTKCVHLTEVYHFHDMIEMLVGCGYEKGTTLFGFGYDFRQSNRIDKSMEGLKHKLETAYKASGGRKVNLISHSMGGIMILCFMSLHRDVFTKYVNKWICLACPFQGAPGCINDSLLTGLEFVDGFQSYFFVKRWTMHQLLVECPSVYEMLANPSYGWKKQPEILVWRKHTKDGDNNTNLESYGPTQSISLFEEALRNNELSYNGKTIRLPFNFDILDWAIKTRQLIANAKLPDGVSFYNIYGTSLDTPFDVCYGSEDSPIEDLSEICHTMPLYSYVDGDGTVPTESAKADGLKATERVGVGASHRGILRDETVFQHIQKWLGVEPMVSKQSKTSKVADAGRIVPMVL 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g00736 446 PANTHER LECITHIN-CHOLESTEROL ACYLTRANSFERASE-RELATED 15 435 - -
Viun5g00736 446 Gene3D alpha/beta hydrolase 80 421 IPR029058 -
Viun5g00736 446 Pfam Lecithin:cholesterol acyltransferase 84 386 IPR003386 GO:0006629|GO:0008374
Viun5g00736 446 SUPERFAMILY alpha/beta-Hydrolases 17 408 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g00736 Viun-Chr5 4600934 4607305 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g00736 4 439 Acyl Lipid Metabolism Gene Families AT3G03310 68.326 0.0 624
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g00736 K22389 - gmx:100797043 842.802
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun5g00736 5 4600934 4607305 Viun5g00736 5 4600934 4607305 ECH