Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g00617 ATGGGCGGTGTCCTTTCTTCGATCCTTGGTGGTGGCGGCGGCGGCGATGAGACGTCGTATTCGGAGGGGGCTTCTGGCGTGACGGCGATCCACTCGTCGGCGCGTTGGCAGCTACACTTCAACGAGCTCCAAGACACCAGCAAGCTCGTCGTGGTAGATTTCTCGGCGTCGTGGTGCGGTCCTTGCAAATTCATAGAGCCAGCGATTCACGCCATGGCCGAAAAGTTCAGTGACGTTGAATTCATCAAGATTGACGTCGACGAACTATCGGATGTGGCGGGGGAGTTTCAGGTGCAGGCGATGCCGACGTTCGTGTTGTTGAGGAAAGGGAAGGTAATTGACAGGGTTGTTGGCGCAAAGAAGGACGAGCTCGAGAAGAAGGTTCAGAAGCATCGAGCTCTTCAAGCCTAG 411 0.5596 MGGVLSSILGGGGGGDETSYSEGASGVTAIHSSARWQLHFNELQDTSKLVVVDFSASWCGPCKFIEPAIHAMAEKFSDVEFIKIDVDELSDVAGEFQVQAMPTFVLLRKGKVIDRVVGAKKDELEKKVQKHRALQA 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g00617 136 CDD TRX_family 39 129 - -
Viun5g00617 136 FunFam Thioredoxin 26 133 - -
Viun5g00617 136 ProSiteProfiles Thioredoxin domain profile. 18 133 IPR013766 -
Viun5g00617 136 MobiDBLite consensus disorder prediction 1 22 - -
Viun5g00617 136 Pfam Thioredoxin 40 129 IPR013766 -
Viun5g00617 136 SUPERFAMILY Thioredoxin-like 40 131 IPR036249 -
Viun5g00617 136 PRINTS Thioredoxin family signature 50 58 - -
Viun5g00617 136 PRINTS Thioredoxin family signature 97 108 - -
Viun5g00617 136 PRINTS Thioredoxin family signature 58 67 - -
Viun5g00617 136 ProSitePatterns Thioredoxin family active site. 51 69 IPR017937 -
Viun5g00617 136 Gene3D Glutaredoxin 15 134 - -
Viun5g00617 136 PANTHER THIOREDOXIN 27 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g00617 Viun-Chr5 3747547 3748458 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g00617 K03671 - gmx:547759 188.348
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun5g00617 5 3747547 3748458 Viun5g00617 5 3747547 3748458 ECH