Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g00602 ATGCCACTACCCAAGTACAGCATGCACTTGGATCTTTGTCTAATGTTATTATGTATCCATGCAGTAGTGGTCTTTGCAGCAAACTCTGACGTAGCAAGGCACGAATCACAAGGCTGGTTAAACCATGGTGGAGATTTGTTCAACCGAAGATATGCTTCCAAGGAGCGTAAGATCAGTCCGAAAACTGCACCAGACCTACGTATGAAGTGGAAGTTCTATACTGGCAGAGACATCACTGCAACACCAGCCATATATGATCGTACCCTTTATTTTCCAAGCTGGAATGGTAACATCTATGCAGTTAAAGAAGCTGATGGATCGCTTGTTTGGAAGCAGAACTTGGACAAATTGACAGGTCTGAAAGCATCTGAAGGCCTTGTTAATAACGTAAATTGGACAGTGTCACGGTCAACTCCTACAGTGGTTGGTGATTTGCTGATTATGGGAATGTATGGCCCTGCTGCTGTTATTGCTGTCAAAAGAGCAACAGGTAAGCTTGTGTGGAAGACCATTTTGGATTACCATCCTAAAGCACTCATCACCATGTCAGGAACATATTACAAAAGAGGTTACTATGTTGGAACATCTTCCCTGGAGTCACTTGTGGAACTTGATGAGTGCTGCACGTTTCGTGGAAGCTTTGTGAAACTTGATCCTGAATCCGGTGACATCGTGTGGAGGACTTATACGATACCAGATAACAATAACACAAAAGGAGGATATGCAGGAGCTGCTATTTGGGGAAGTAGTCCTTCCATTGATGAGAAAAGAAACCATGTCTATATGGCCACAGGGAACCTCTATGCTGCCCCATTACGAATACGCCAGTGTCGAGAGAGACAAATTAATCGAACTCAGCGTACTCAACCAGACGAGTGTGTGGAACCAGACAACCACTCCAACTCAATCCTAGCCCTTGATTTGGATTCTGGGAAGATCAAATGGTACTACCAGGCTGGAGGCTACGATGTGTCTCTCTTAGTATGTAGCGATTCTCCCACACCTGCTCCTGATTGTCCCCCTCAAGCAGACAAACCAGATGTTGATTTTGGTGAGGCACCTATGATGTTGACCGTAGATATAAATCGGAACAAAAGAGATATTGTTGTTGCAGTCCAGAAAAGTGGCATTGCATGGGCTTTGGATCGCAATAATGGTGACCTCGTTTGGTATACGGAAGCTGGGCCATATGGGTTGGCAGGAGGTGGATCATGGGGTGCAGCAACTGATGAAAAGAGGGTTTACACGAACATTGTGAATTCTGATGCCCAAAATTTCACGCTCAGACCCTCAAACAAGATTACAACTGCGGGTGGGTGGGTGGCAATGGATGCTAACAATGGTAGAGTTCTGTGGTCAACAGCAAACCCTGCTAACAGCACTGCTTATGGTCCTGTTAGTGTTGCAAATGGTGTTCTCTTTGTTGGATCAGCTGATAGAATGGGATACATATATGCAATTGATGCAAAGAGTGGGAAAATTTTATGGTCCTATAAAACTGGAGCCAGTGTCTATGGAGGCATGTCAATCAACAAAGGGTGCATCTATGTGGGCCATGGATACAGTGCTGCTTATGGGTTTAACTTGAACTTACCACAAGGAAACTCTCTCTTTGCCTTCTGTGTTAAGAAATAA 1635 0.4453 MPLPKYSMHLDLCLMLLCIHAVVVFAANSDVARHESQGWLNHGGDLFNRRYASKERKISPKTAPDLRMKWKFYTGRDITATPAIYDRTLYFPSWNGNIYAVKEADGSLVWKQNLDKLTGLKASEGLVNNVNWTVSRSTPTVVGDLLIMGMYGPAAVIAVKRATGKLVWKTILDYHPKALITMSGTYYKRGYYVGTSSLESLVELDECCTFRGSFVKLDPESGDIVWRTYTIPDNNNTKGGYAGAAIWGSSPSIDEKRNHVYMATGNLYAAPLRIRQCRERQINRTQRTQPDECVEPDNHSNSILALDLDSGKIKWYYQAGGYDVSLLVCSDSPTPAPDCPPQADKPDVDFGEAPMMLTVDINRNKRDIVVAVQKSGIAWALDRNNGDLVWYTEAGPYGLAGGGSWGAATDEKRVYTNIVNSDAQNFTLRPSNKITTAGGWVAMDANNGRVLWSTANPANSTAYGPVSVANGVLFVGSADRMGYIYAIDAKSGKILWSYKTGASVYGGMSINKGCIYVGHGYSAAYGFNLNLPQGNSLFAFCVKK 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g00602 544 Pfam PQQ-like domain 69 101 IPR002372 -
Viun5g00602 544 Pfam PQQ-like domain 217 498 IPR002372 -
Viun5g00602 544 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 35 507 IPR011047 -
Viun5g00602 544 Gene3D - 22 514 - -
Viun5g00602 544 SMART ire1_9 465 499 IPR018391 -
Viun5g00602 544 SMART ire1_9 82 113 IPR018391 -
Viun5g00602 544 SMART ire1_9 139 171 IPR018391 -
Viun5g00602 544 SMART ire1_9 427 455 IPR018391 -
Viun5g00602 544 SMART ire1_9 183 229 IPR018391 -
Viun5g00602 544 SMART ire1_9 251 318 IPR018391 -
Viun5g00602 544 PANTHER QUINOPROTEIN ALCOHOL DEHYDROGENASE (CYTOCHROME C) 15 542 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g00602 Viun-Chr5 3655578 3658159 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g00602 - - gmx:102668917 938.332
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun5g00602 5 3655578 3658159 Viun5g00602 5 3655578 3658159 ECH