Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g00552 ATGAAGTTTGGGAAAGAATTCGTCTCACAGATGGTGGCAGAATGGGAAGAAGCATACATGGATTACAATTCCCTGAAAGCCACTCTGAAACACATATCGAGGTTTAGGGAGTTAAACGAGTCAGCAGCAATGGCATCAACCCCAAAAGGGTCACTGAAGAGAAGGTTAACCCTCTATAGAGCCTTCAGTGGTCTAACTGGTGGACAAAGAGGGTCCCCTAGGAAGAGTGAGGATGAAGTTATACTTGTTCGTGCAGAGGAGGGTGAAGGTTCAGAAGGGTCGTACCAGACCATGTTCCTCAAACCTTCTGAAGAAGGGGAAGAGCAAGATCTTGTTTTTTTCAAGAAACTTGATCGTGAGTTTAACAAGGTCAATAACTTCTACAAGAAAATGGTGAAGGAAATGGTTGAGGAGGCAGAGGAGTTGAGTAAACAAATGAATGCTTTGATTGCGTTGAGAATAAAGATTGATAAGGTGGGATTCAGAAATGTTGCTAGCAATGGGAGCTCAAATTCAATTTCCTTGAGTGATCATATATATAATGCCAGACCTGGTCACTCACGAGTGCACATGGATGTGATTCATGAAATTGAGTTGAGCAGTGAAAGTCATTTGGAAAATGGAACTGGAAACTACGAGAAACAAACCACTCCTGATGAAGGCTTTAGACCAGCTTCAGTGGAGATCCTTGACCGTGTTAAGATCAACATGACCACACTAGATTCTCCAATATCAACCATAAAAGGGCTTCTCTCGAGTTCAAAACCTGGCCAATCATTTAGCAGAAAAGAGCTCACGAAAGTGGAGGAACAAATGAGCATAGCCTTAAAGGAATTCTATCATAAGCTTCGACTTCTAAAAAGCTATAGTTTCTTAAACTTGTTGGCATTCTCAAAAATCATGAAGAAATATGACAAGGTCAGTTCAAGGAATGCATCAAAGGATTACTTAAAGATGGTGGACAGTTCATATGTTGGCAGTTCAGATGAGGTTAATAGGCTCATGGAAAGGGTTGAACATGCCTTCATTAAGCACTTCGCAAATGGGAATCACAGGAAAGGAATGAATACATTAAGACCAACTGCTAAGAAAGAGCGGCATAGAATCACATTCTTACTGGGGTTATTTACTGGCTGCTCAATTGCTCTCATTGTGGCTCTTATTATACTCATACATGCAAGAAATATTCTATATAGCGAGGGACGTACTAAATATATGGACAACATATTTCCTCTTTATAGCCTCTTTGGATACCTAGTCTTGCATATGATCATGTACTCTGCAAATGTATACTTCTGGAGGCGTTATAAAATCAACTACTCCTTTATATTTGGCTTCAAGGAAGGAACAGAATTGGGATATAGAGAAGTCTTTCTTCTTAGCTCTGGCCTTGCAGTGCTCTCATTGGCTGCAGTCCTCTCAAACTTGGATATGGAAATGGATCAGAGAACAAAAAGTTTCTCAGCATTTACAGAGTTAGTCCCTTTAGGCCTTGTGATTGTTCTGCTTCTCATTACATTTTGTCCCTTCAACATCATATATAAATCCAGTCGCTTCTTCCTTATTCGGTGTGCATTTCATTGCATTTGTGCTCCCCTTTACAAGGTCAATCTCCCAGAAAATTTCTTGGCAGACCAGCTTACCAGCCAGGTGCAAGCCTATAGAAGTTTGGAATTCTATGTCTGCTACTATTTCTGGGGAAACTTCAAGACCAGGTCAAACGAGTGTCTTCAGAGTGATCTCTATAAGGCATTTTACTTAATTGTAGCTATTATTCCATTCTGGATCCGCTGTCTCCAGTGCTTTCGACGCTTACTTGAAGAAAAAAATGCAATGCATGGTCTGAATGGGCTAAAGTACATATCAACAATAGTAGCACTTGTGATGAGGACTACTAATGAGTTCCACAGAGGAATGGTTTGGCAAATTCTAGCTGCAACTTCTTCAAGCATTGCAACGATTGTTAATACATATTGGGATGTAGTCATTGACTGGGGTTTGCTCAGAAGAAATTCAAAAAATCCATGGTTGAGAGAAAAACTCTCTGTACCAAACAAAAGTGTATATTTTGCTGCTATGGTGTTGAATGTTGTGTTACGGCTTGCATGGATGCAATCTGTTTTAGGCATTAGAGAAGCTCCTTTCCTGCATAGAACAGCTCTCACTGCTCTTGTAGCATGCTTGGAGATCCTTCGCCGTGGTATTTGGAACTTTTTCAGGTTGGAGAATGAACATTTAAACAATGTTGGCAACTACCGAGCATTCAAATCAGTGCCCCTGCCTTTTAATTATGAAGATGAAGAAGAAATTACTGTGACATAA 2322 0.4031 MKFGKEFVSQMVAEWEEAYMDYNSLKATLKHISRFRELNESAAMASTPKGSLKRRLTLYRAFSGLTGGQRGSPRKSEDEVILVRAEEGEGSEGSYQTMFLKPSEEGEEQDLVFFKKLDREFNKVNNFYKKMVKEMVEEAEELSKQMNALIALRIKIDKVGFRNVASNGSSNSISLSDHIYNARPGHSRVHMDVIHEIELSSESHLENGTGNYEKQTTPDEGFRPASVEILDRVKINMTTLDSPISTIKGLLSSSKPGQSFSRKELTKVEEQMSIALKEFYHKLRLLKSYSFLNLLAFSKIMKKYDKVSSRNASKDYLKMVDSSYVGSSDEVNRLMERVEHAFIKHFANGNHRKGMNTLRPTAKKERHRITFLLGLFTGCSIALIVALIILIHARNILYSEGRTKYMDNIFPLYSLFGYLVLHMIMYSANVYFWRRYKINYSFIFGFKEGTELGYREVFLLSSGLAVLSLAAVLSNLDMEMDQRTKSFSAFTELVPLGLVIVLLLITFCPFNIIYKSSRFFLIRCAFHCICAPLYKVNLPENFLADQLTSQVQAYRSLEFYVCYYFWGNFKTRSNECLQSDLYKAFYLIVAIIPFWIRCLQCFRRLLEEKNAMHGLNGLKYISTIVALVMRTTNEFHRGMVWQILAATSSSIATIVNTYWDVVIDWGLLRRNSKNPWLREKLSVPNKSVYFAAMVLNVVLRLAWMQSVLGIREAPFLHRTALTALVACLEILRRGIWNFFRLENEHLNNVGNYRAFKSVPLPFNYEDEEEITVT 773
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g00552 773 PANTHER XENOTROPIC AND POLYTROPIC RETROVIRUS RECEPTOR 1-RELATED 1 766 - -
Viun5g00552 773 ProSiteProfiles SPX domain profile. 1 318 IPR004331 -
Viun5g00552 773 Pfam SPX domain 1 320 IPR004331 -
Viun5g00552 773 CDD SPX_PHO1_like 2 314 IPR034092 -
Viun5g00552 773 Pfam EXS family 410 746 IPR004342 GO:0016020
Viun5g00552 773 ProSiteProfiles EXS domain profile. 577 772 IPR004342 GO:0016020
Viun5g00552 773 Coils Coil 125 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g00552 Viun-Chr5 3164767 3169501 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g00552 - - gmx:100795104 1308.12
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun5g00552 5 3164767 3169501 Viun5g00552 5 3164767 3169501 ECH