Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g00257 ATGGCCACCACTTTCTATTCAACACATTGTCGTTCACTCGCCACCACCTCCTCCTCTTCCTCAGCTTCCTTCCAACCCTCTCCCTTCTCGTCTAACCTCGCTTACCTTCAACGCGTCACCTTCTCGCACCGCTTTATCGCTTCTAAGGTCTCTCTCAAGTATCAACCCCAGTCGTATCAGATTCCGGTCCACACCCAGCAACAGGAAGGTGCAGTAGCTTCTTCCGTGGCGCCTGTTGAAAACGGCACTTCTCACAAGCAGCTGAATGCTGAATTATTGTCTGTTAAGTCCCCGAAGGAGTCTCTAGTTGAAGACGGTTTTGAAAAGGATGGAAATGAGTCCACTGTTAGTATTACGGTTGTCGGAGCCTCTGGGGACCTTGCTAAGAAGAAGATATTTCCAGCTCTCTTTGCACTTTACTATGAGGATTGTCTCCCTAAGCATTTCACCATCTATGGTTACGCACGGAGTAAGATGACTGATGCAGAACTGAGAAATATGGTTAGCAGGACCCTCACTTGTAGAATTGATAAGAGAGAGAACTGCAATGAGAAGATGGAGCAATTCCTAAAAAGATGTTTCTACCATTCTGGTCAATATGATTCTCAGGAACACTTTGCCGTGCTAGACAAGAAGCTGAAGGAACAAGAGGGTGGGAGAACTTCTAATCGCCTGTTTTATCTTTCAATTCCTCCTAATATATTTATAGATGCTGTAAAATGTGCAAGCTTGTCAGCTTCTTCTGGTAATGGTTGGACCAGGGTCATTGTTGAAAAGCCTTTTGGTCGTGATTCTGAATCTTCAGCTGCATTAACAAAATCACTCAAGCAGTATCTGACTGAGGATCAAATTTTCAGAATTGACCACTATCTTGGGAAAGAGCTTGTGGAAAATCTTTCTGTCCTCCGATTCTCAAATCTCATCTTTGAGCCATTATGGTCAAGGCAGTATATAAGAAATGTACAGTTGATATTCTCGGAAGATTTTGGCACTGAAGGACGTGGCGGGTACTTTGACCATTATGGTATCATAAGAGACATTATGCAGAATCATTTACTTCAAATACTAGCACTCTTTGCAATGGAAACCCCTGTTAGTTTGGATGCAGAGGATATAAGAAATGAAAAGGTCAAGGTTCTTCGTTCAATGAGACCCCTACAACTTGAAGATGTGGTTATAGGCCAGTATAAGAGTCACACAAGAGGAGGTGTTACATATCCAGCCTACACTGATGACAAAACTGTACCAGTAGGCAGCTTAACCCCAACATTTGCTGCAGCTGCCCTCTTTATAGATAATGCAAGATGGGATGGGGTACCTTTCCTGATGAAGGCAGGGAAAGCATTACACAACAAAGGAGCTGAGATACGGGTACAGTTCAGGCATGTGCCGGGTAATTTGTACAACCGGAACTTTGGTACTGATCTTGATCGGGCGACCAATGAACTTGTGATTAGAGTTCAGCCTGATGAGGCTATTTATTTGAAGATAAACAACAAAGTACCAGGTCTGGGAATGAAGTTGGACCGCAGTAATCTAAATCTTCACTATGCAGCAAGATATTCAAAGGAGATTCCAGATGCTTATGAGAGGCTACTGTTGGATGCCATTGAAGGAGAAAGAAGACTCTTCATACGTAGTGATGAACTGGATGCAGCATGGTCACTCTTTACACCTGTACTGAAGGAACTAGAAGAGAAAAAGATAATTCCAGAGTACTATCCTTATGGTAGTAGGGGTCCTGTTGGTGCTCACTATCTTGCAGCCAGATACAACGTAAGGTGGGGTGACCTTGGTTCAGACATTGACCGCTAA 1815 0.4358 MATTFYSTHCRSLATTSSSSSASFQPSPFSSNLAYLQRVTFSHRFIASKVSLKYQPQSYQIPVHTQQQEGAVASSVAPVENGTSHKQLNAELLSVKSPKESLVEDGFEKDGNESTVSITVVGASGDLAKKKIFPALFALYYEDCLPKHFTIYGYARSKMTDAELRNMVSRTLTCRIDKRENCNEKMEQFLKRCFYHSGQYDSQEHFAVLDKKLKEQEGGRTSNRLFYLSIPPNIFIDAVKCASLSASSGNGWTRVIVEKPFGRDSESSAALTKSLKQYLTEDQIFRIDHYLGKELVENLSVLRFSNLIFEPLWSRQYIRNVQLIFSEDFGTEGRGGYFDHYGIIRDIMQNHLLQILALFAMETPVSLDAEDIRNEKVKVLRSMRPLQLEDVVIGQYKSHTRGGVTYPAYTDDKTVPVGSLTPTFAAAALFIDNARWDGVPFLMKAGKALHNKGAEIRVQFRHVPGNLYNRNFGTDLDRATNELVIRVQPDEAIYLKINNKVPGLGMKLDRSNLNLHYAARYSKEIPDAYERLLLDAIEGERRLFIRSDELDAAWSLFTPVLKELEEKKIIPEYYPYGSRGPVGAHYLAARYNVRWGDLGSDIDR 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g00257 604 Pfam Glucose-6-phosphate dehydrogenase, C-terminal domain 301 595 IPR022675 GO:0004345|GO:0006006|GO:0050661
Viun5g00257 604 PANTHER GLUCOSE-6-PHOSPHATE 1-DEHYDROGENASE G6PD 106 595 IPR001282 GO:0006006|GO:0016614|GO:0050661
Viun5g00257 604 FunFam Glucose-6-phosphate 1-dehydrogenase 287 596 - -
Viun5g00257 604 ProSitePatterns Glucose-6-phosphate dehydrogenase active site. 288 294 IPR019796 GO:0004345|GO:0006006
Viun5g00257 604 Pfam Glucose-6-phosphate dehydrogenase, NAD binding domain 120 298 IPR022674 GO:0006006|GO:0016614|GO:0050661
Viun5g00257 604 FunFam Glucose-6-phosphate 1-dehydrogenase 112 286 - -
Viun5g00257 604 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 114 301 IPR036291 -
Viun5g00257 604 Gene3D - 112 286 - -
Viun5g00257 604 Hamap Glucose-6-phosphate 1-dehydrogenase [zwf]. 115 597 IPR001282 GO:0006006|GO:0016614|GO:0050661
Viun5g00257 604 SUPERFAMILY Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 288 595 - -
Viun5g00257 604 Gene3D Dihydrodipicolinate Reductase; domain 2 287 596 - -
Viun5g00257 604 NCBIfam glucose-6-phosphate dehydrogenase 116 596 IPR001282 GO:0006006|GO:0016614|GO:0050661
Viun5g00257 604 PRINTS Glucose-6-phosphate dehydrogenase signature 330 347 IPR001282 GO:0006006|GO:0016614|GO:0050661
Viun5g00257 604 PRINTS Glucose-6-phosphate dehydrogenase signature 278 306 IPR001282 GO:0006006|GO:0016614|GO:0050661
Viun5g00257 604 PRINTS Glucose-6-phosphate dehydrogenase signature 348 364 IPR001282 GO:0006006|GO:0016614|GO:0050661
Viun5g00257 604 PRINTS Glucose-6-phosphate dehydrogenase signature 254 267 IPR001282 GO:0006006|GO:0016614|GO:0050661
Viun5g00257 604 PRINTS Glucose-6-phosphate dehydrogenase signature 435 461 IPR001282 GO:0006006|GO:0016614|GO:0050661
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g00257 Viun-Chr5 1472497 1477210 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g00257 K00036 - gmx:100793694 1107.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun5g00257 5 1472497 1477210 Viun5g00257 5 1472497 1477210 ECH