Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g00251 ATGCATTACCAAGTGGAGTCTCCTTCTGCTGCTGCTGCTGCATGGAGCTACCTGATGAGGGTTCGGAGCATGGAAGAGGATCAGATGGAGAGAGTGGTGAGGTTGGCCTCTCAGAGTGCTGTGGTGATTTTCAGTGTGAGTAGCTGTTGCATGTGCCATGCAATGAAGACGCTCTTCTGTGGCATGGGGGTTAACCCCACTGTTCATGAGCTCGACCAAGACCCCAAAGGAAAAGACATGGAGAGAGCACTGATGAGGCTTCTTGGAAATGGAATCAACACCACTGCTGCAACTGTTCCTGTCGTCTTCATTGGAGGAAAACTTGTTGGCTCCATGGACAGGGTTCTGGCCTTCCACATCAGTGGCACCCTTGTCCCTCTTCTCAAACAAGCTGGAGCTTTGTGGCTTTGA 411 0.5134 MHYQVESPSAAAAAWSYLMRVRSMEEDQMERVVRLASQSAVVIFSVSSCCMCHAMKTLFCGMGVNPTVHELDQDPKGKDMERALMRLLGNGINTTAATVPVVFIGGKLVGSMDRVLAFHISGTLVPLLKQAGALWL 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g00251 136 Gene3D Glutaredoxin 22 135 - -
Viun5g00251 136 ProSiteProfiles Glutaredoxin domain profile. 29 135 - -
Viun5g00251 136 Pfam Glutaredoxin 41 109 IPR002109 -
Viun5g00251 136 SUPERFAMILY Thioredoxin-like 29 135 IPR036249 -
Viun5g00251 136 NCBIfam glutaredoxin-like family 32 136 IPR011905 -
Viun5g00251 136 FunFam Glutaredoxin family protein 29 135 - -
Viun5g00251 136 PANTHER GLUTAREDOXIN 29 136 IPR011905 -
Viun5g00251 136 CDD GRX_GRXh_1_2_like 40 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g00251 Viun-Chr5 1446365 1447029 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g00251 1 136 Miscellaneous Gene Families AT3G02000 57.353 4.56e-46 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g00251 K03676 - gmx:100797942 231.491
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun5g00251 5 1446365 1447029 Viun5g00251 5 1446365 1447029 ECH